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scnpilot_p_inoc_scaffold_37222_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(542..973)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator AsnC family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JZ82_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 143.0
  • Bit_score: 242
  • Evalue 2.80e-61
transcriptional regulator AsnC family similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 143.0
  • Bit_score: 242
  • Evalue 7.80e-62
Transcriptional regulator AsnC family {ECO:0000313|EMBL:ACM37327.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 143.0
  • Bit_score: 242
  • Evalue 3.90e-61

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGCAGATCACGGACAAAGATCGGGAGCTTTTGGCGCTGCTGGGCGAAAACGCCCGCCTTCCGGTGGCGACGCTGGCCCGACGGCTCGGCCTGTCGCGCACGACGGTGCAGGCCCGCATCGAGCGTCTGGAGCGGGAAGGCGTGATCGCCGGTTACGGCCTGCGCCTGTCGGAAGCCTATCTGGCCGGCCTGATCCGCGCCCATGTGCTGATCACCATTGCGCCGAAAGCCCTGTCGGCGGTGACAGCGGAGCTGGCCGCCATCGGCGAGGTGACGGCGCTGCATTCCGTCAACGGTCCCTATGACCTGATTGCAATCATCGCCGCGCCGTCGATTGCCGAGCTCGACCGGCTGATCGACCGTATCGGCGAACTCGCCGGCGTCGAGCGCACCTTGTCGTCGATCATCCTGTCGACCCGGATCGCCCGCTGA
PROTEIN sequence
Length: 144
MQITDKDRELLALLGENARLPVATLARRLGLSRTTVQARIERLEREGVIAGYGLRLSEAYLAGLIRAHVLITIAPKALSAVTAELAAIGEVTALHSVNGPYDLIAIIAAPSIAELDRLIDRIGELAGVERTLSSIILSTRIAR*