ggKbase home page

scnpilot_p_inoc_scaffold_37224_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..1767)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVV2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 587.0
  • Bit_score: 602
  • Evalue 5.60e-169
Surface antigen (D15) {ECO:0000313|EMBL:KFC69578.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 578.0
  • Bit_score: 903
  • Evalue 1.30e-259
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 584.0
  • Bit_score: 577
  • Evalue 5.50e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
ATGATGGCGGCGGGCTTGGGCATGAATTTGCGCGATCTCTCGTCGCTCGACGTGTTCGGCCTCTTCACCAAGAAGGACGAGCCGCCGGCGCCGAGCGCTGCTGCCTTGCCCTACAAGCTCGAATTCGACCTCGGCGAGGCCGACGATGCCAAGGCGCTGACGCGCTCGCTGCAGGACGCCTCGCTGCTCTATCGGCTGCGTCAGGACGCCCCGCCCGACGGCGAAAGCCTGTCGCGCCGGATGGCGACCGATCTCAACCCGATGCTCGATGCGCTCTGGTCGCAGGGCTATTTCAACGCCGATGTCACGTTGATCGTCGATGGTGTCTCGCTCAAGGTCGGGGCCGAGCCCGACGCGGCGCTGGTGCGGACGCTCGAAGCCCATCGCAACCGCGACGCCGTGCCGATCACGGTGCGGGCCCGGCCCGGAAAGATCTTCGGCCTGCGCAGGATCGACGTCGTCGAGCGCGACGAGGCAGGTCCCCCGGCGATCACCGATCCGATCAAGGTCTCTCGACTGAAGGAAGGCGATCCTGCGACCGCCTCCGCGCTTCGGGCGGCGCAGGCGGCATTGGTCGACCATATGCGGGCACAGTCACGGCCGCTCGCCAAGGTCGTCGAACTCCGGCCCGTCGTCGACCATGCCGCCGGCATCATGGATGTGACCTATGTCATCGCGCCCGGCCCGCTCGCCGGCTTCGGCGACATCACGGTCGGGCAGACCGACGAGATTCCGCCCGAGGTCGTGCGCTCCTTCATCTATCTCGAGCCGGGCAACCCCTATTCGCCGAAGGCCCTGACTGACACCCGCCGCTCGATCGCGACGATCCCGGCCGTCGGCTCCGTCCGTATCCGTGAAGGCGACAAGCTCGACGGTGCCGGCAACCTACCGATCTTCGTCGAGGTGACCGAGCGGCCCAAGCGCCTGCTCGGCTTCTCGGCCCGCTATTCGACGATCGACGGGCCAGCGGTGAAGACCTATTGGGAGCACCGCAACCTGTTCGGTGGCGCCGAGCGCTTGCGGCTGGAGGCCAGCGTCTTCTTTGCGCCGCGCATCGACGGTACCAAGATCCAGCGCTTCGGCGATTTCAAGGAATCCGATCTCGGCGGCCGCTTCGCCTTCAGCTTCATGAAGCCGGCCCTCGGCGGCAGCCGCAACGACCTGTTGCTCGACGGCGTCGCGACGCGCGAGCGCGTCGGCCTCAACCGCTATGGCGGCTACACCGCCCGCTACGCCAACGTCACGACGGCGATCCGCAACCGCTTCAGCGATACTTTCTCGGTCCAGGGCGGCATCGAGGTCGAGCGCGGTCAGACCAGCGACGTGCTCGGGCAGGTGGATTATACTCTCGTCGGCATTCCCCTTTCGGTGAAATACGATTCCACCGACAGCTTGCTTGATCCCACGCGCGGCTATCGCGCGACGGCTTCCTTCACGCCCTATCCGACCTTCCTCGGCTCGACTGTCGGGATCTACCAGACCAAGGCGTCGGTCTCCGCCTATTACGCGCTCGACGAAGACGCCCGTTACATCCTCGCCGGCCGCATCGGCTTCGGCTCTGTTGCCGGCGCCAGCCTCGACGAGATTCCGGCGACGCGGCGCTTCTATGCCGGCGGCGGCGGTTCCGTGCGCGGTTATGCCTATCGTAGCCTGTCGCCGCTCGGACCCTACCAGCAGATCATCGGCGGACGCAGCCTGTTGGAACTCTCAGCCGAGGCACGCATCAAGATCACCGATACGATCGGAATCGTGCCCTTCTTCGACGCC
PROTEIN sequence
Length: 589
MMAAGLGMNLRDLSSLDVFGLFTKKDEPPAPSAAALPYKLEFDLGEADDAKALTRSLQDASLLYRLRQDAPPDGESLSRRMATDLNPMLDALWSQGYFNADVTLIVDGVSLKVGAEPDAALVRTLEAHRNRDAVPITVRARPGKIFGLRRIDVVERDEAGPPAITDPIKVSRLKEGDPATASALRAAQAALVDHMRAQSRPLAKVVELRPVVDHAAGIMDVTYVIAPGPLAGFGDITVGQTDEIPPEVVRSFIYLEPGNPYSPKALTDTRRSIATIPAVGSVRIREGDKLDGAGNLPIFVEVTERPKRLLGFSARYSTIDGPAVKTYWEHRNLFGGAERLRLEASVFFAPRIDGTKIQRFGDFKESDLGGRFAFSFMKPALGGSRNDLLLDGVATRERVGLNRYGGYTARYANVTTAIRNRFSDTFSVQGGIEVERGQTSDVLGQVDYTLVGIPLSVKYDSTDSLLDPTRGYRATASFTPYPTFLGSTVGIYQTKASVSAYYALDEDARYILAGRIGFGSVAGASLDEIPATRRFYAGGGGSVRGYAYRSLSPLGPYQQIIGGRSLLELSAEARIKITDTIGIVPFFDA