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scnpilot_p_inoc_scaffold_37409_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..473)

Top 3 Functional Annotations

Value Algorithm Source
OmpA-like transmembrane domain protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J6N2_COMT2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 161.0
  • Bit_score: 153
  • Evalue 2.40e-34
porin similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 104.0
  • Bit_score: 159
  • Evalue 9.50e-37
Porin {ECO:0000313|EMBL:AJP49506.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 104.0
  • Bit_score: 159
  • Evalue 4.70e-36

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGCAGCGCGCCTCCCGTTTTCGTTCACGGCCCGGTTGCCCCGGTGCCGCATGCCGATACCGTTTCGCTTTCGCCCTGGCGCTGGCCTGCACCATTGTTTCGACACCGGCTCGGGCCGCGGTTGACGAGGCGCCGGCAACGGAATCCATACCGGATGACGCGACCGCTGCGGCGCCTGCCATCGAACGCGAAGACTGGAACGCCAAATTCCAATCGACCTACGTCTGGCAGCGCAAGCAGCCGTTCCGCGCGCCCTACACCGGGCCACGCAGCCTGACGCCGACCCGGGAACACAGCTACTCGTTCACGGCCACCGCCGCCTTCGGGCTGCGGCCATGGGCCGGCGCGGAGCTGTATTTCAATCCCGAGCTGGCGCAGGGCGTGCCGCTGTCGGGGCTCACCGGGCTGGGCGGCTTTACCAACGGCGAGATCGCGCGCACCGCGGGCCCTGACCTGCAGCTGTATCGCGCG
PROTEIN sequence
Length: 157
MQRASRFRSRPGCPGAACRYRFAFALALACTIVSTPARAAVDEAPATESIPDDATAAAPAIEREDWNAKFQSTYVWQRKQPFRAPYTGPRSLTPTREHSYSFTATAAFGLRPWAGAELYFNPELAQGVPLSGLTGLGGFTNGEIARTAGPDLQLYRA