ggKbase home page

scnpilot_p_inoc_scaffold_39429_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(559..903)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MXC0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 114.0
  • Bit_score: 159
  • Evalue 1.90e-36
response regulator of the LytR/AlgR family similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 112.0
  • Bit_score: 158
  • Evalue 1.20e-36
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AFD06288.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 112.0
  • Bit_score: 158
  • Evalue 5.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solitalea canadensis → Solitalea → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCTGAAATGTATTATTATTGATGATGAACCCCTTGCCCGGTCCTTAATGCGCGAAATGCTGGAGCCACTTGAAATGGTGCAGATCGTAGATGAATGCGCCAATGGTTTTGAAGGACTGAAAAGCGTGCAGACCCATCAACCCGACCTCATCTTCCTCGATGTGCAAATGCCGAAGATCAACGGCTTTGAGATGCTGGAGCTGATCGAAAATCCGCCTTCCGTCATCTTTGTTACCGCTTTTGATGAATATGCCGTTCAGGCCTTTGATGTCAATGCAATCGATTATCTGTTAAAGCCCATAGAGCCTTCCCGCCTGGAGAAAGCCATCGCTAAAGTACAATAG
PROTEIN sequence
Length: 115
MLKCIIIDDEPLARSLMREMLEPLEMVQIVDECANGFEGLKSVQTHQPDLIFLDVQMPKINGFEMLELIENPPSVIFVTAFDEYAVQAFDVNAIDYLLKPIEPSRLEKAIAKVQ*