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scnpilot_p_inoc_scaffold_39014_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 55..1206

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6Z6_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 383.0
  • Bit_score: 573
  • Evalue 1.40e-160
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 383.0
  • Bit_score: 573
  • Evalue 3.90e-161
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM42021.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acido similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 383.0
  • Bit_score: 573
  • Evalue 2.00e-160

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAAATTCCCCCGCCTGCAGCGGCGCACGCTCGCGCTGATCGCGGTCATTGCGCCGTTCGTCCTGCTGTTCGCGTTCGTCGTCCTGCGCTCGGGTCCGCTGGCGCCGGTGGCGGTGACCGTGTCCACCACGGAGCCGCAGGCCATCGCGCCGGCGTTGTCGGGCATCGGCACGGTGCAGGCACGCTACACGTACAGGATCGGCCCGACCTATGCCGGGCGGGTCGCGCGGCTGGACGTGCACGTGGGCGACGTGGTCAGGGCGGGCCAGGTATTGGGCGAGATGGACCCGGTGGACCTGGACCAGCGCATCGGCGCACAGCAGGCCGCGATCGGCAGCGCCGAAGCTGCCTTGCGGCAGGCCGAGGCGAAGCGTGCCTTCGCGCAGACCCAGGCGAACCGCTACGAGCAACTGCTGGCTGCGCGCGGCACCAGCGAGGAAAACGTCGCTACCCGGCGGCAGGAGCTGGCGGTCGCCAACGCGGCGCTGGAAGCGGCGCGCGGAGACGCCGGCCGCATGCGCGCCGAACTGGAAGCCTTGCGCGCGCAACGCGGCAACCTGCGGCTGGTGGCGCCGGTCGCCGGACTGGTGACCGCGCGCGATGCGGACCCCGGTACGACCGTGGTGGCGGGCCAGCCGGTCGTCGAGCTGATCGATCCCGCGAGCCTGTGGATCGATACGCGCTTCGACCAGATCAGCGCGGAAGGCCTGGCCGCCGGCTTGCCCGCCCGCATCGTGCTGCGCTCGCGGCCGGGCGGGCTCCTGCCGGGCCGCGTGCTGCGGGTCGAACCCCTGGCCGACGCGGTAACGGAAGAAACGCTGGCCAAGATCGTCTTCGACACGCCGCTGTCGCCGCTGCCGCCGGTGGGAGAACTGGCCGAAGTCACCGTGCAACTGCCGGCATTGCCCGTCGCGCCGACGATTCCCAACGCCGCCATCCGCACGGTCGGCGGGAAGCGCGGCGTGTGGAAGCTCGCCGGCGGCAAGCTCGCCTTCGCGCCGGTCGTGCTCGGCCGTTCCGATCTCGACGGTCGCGTGCAAGTGGCGAAGGGGCTGGCCGCCGGCGACCGGCTGGTGGTGTACAGCGAGAAGGCGCTCACTGCGCGCAGCCGCATCCACGTGGTCGATCGCCTTCCCGGGGTGTCGCCGTGA
PROTEIN sequence
Length: 384
MKFPRLQRRTLALIAVIAPFVLLFAFVVLRSGPLAPVAVTVSTTEPQAIAPALSGIGTVQARYTYRIGPTYAGRVARLDVHVGDVVRAGQVLGEMDPVDLDQRIGAQQAAIGSAEAALRQAEAKRAFAQTQANRYEQLLAARGTSEENVATRRQELAVANAALEAARGDAGRMRAELEALRAQRGNLRLVAPVAGLVTARDADPGTTVVAGQPVVELIDPASLWIDTRFDQISAEGLAAGLPARIVLRSRPGGLLPGRVLRVEPLADAVTEETLAKIVFDTPLSPLPPVGELAEVTVQLPALPVAPTIPNAAIRTVGGKRGVWKLAGGKLAFAPVVLGRSDLDGRVQVAKGLAAGDRLVVYSEKALTARSRIHVVDRLPGVSP*