ggKbase home page

scnpilot_p_inoc_scaffold_40051_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 802..1155

Top 3 Functional Annotations

Value Algorithm Source
Copii-coated vesicle membrane protein P24, putative n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8H622_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 78.0
  • Bit_score: 61
  • Evalue 5.50e-07
copii-coated vesicle membrane protein P24, putative similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 78.0
  • Bit_score: 61
  • Evalue 1.70e-07
Copii-coated vesicle membrane protein P24, putative {ECO:0000313|EMBL:ELR20662.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 78.0
  • Bit_score: 61
  • Evalue 7.60e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 354
ATGCGTCTGGCCGCCCTGTACGCGTTGTCGCTGGCCCTGGCGGCGTTGTCCGCGATGGCGGGGCTCGGCGCGGCGTCGTACCTGACGTTTCAGGTCGAGCCCAAGGCCGTGCAGTGCTTCAACGAGGACCTCGCCGCGGGCGCCCAGTTCGACATGAGCTTCGAGGTCACCCGCGGCGGGCTGCTCGATATCAAGTTCCAGCTCTATGATCCCAACAGGAACCTGATGCAGGAGCGCATGGCGTTCTTCAACAAGCCCGTATGTCACTGTTGTCACTGCTTCTGTTACTCTTGCTTATGGCAGTTGAAGCTCTCTCCTATCATGTTGACCCATATGCACTTTTTGCGGGGATAA
PROTEIN sequence
Length: 118
MRLAALYALSLALAALSAMAGLGAASYLTFQVEPKAVQCFNEDLAAGAQFDMSFEVTRGGLLDIKFQLYDPNRNLMQERMAFFNKPVCHCCHCFCYSCLWQLKLSPIMLTHMHFLRG*