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scnpilot_p_inoc_scaffold_40142_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1254..1631)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UP84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 248
  • Evalue 2.60e-63
XRE family transcriptional regulator {ECO:0000313|EMBL:ENY80235.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 248
  • Evalue 3.60e-63
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 125.0
  • Bit_score: 233
  • Evalue 3.20e-59

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTCCAACTGCCGCAGGATACCCAGCTTGCGATTACCGCGCTGCTCGGCGCCGATGGCGCCCATGCGCCGACGCGCGTCGAACAGGCGCTGACCGCGCGTCCGACCGAGGACATGATCGCCATGCGCGTCACCTCGTCGATCGGCGACTATCGCGCGGGCGACGAGATATGGTGCCGCAAGGTCGAGGGCGACTGGACCAGCGCACTCAATCGCGACCTGCTTGTGCCGCGCCCCGCCGGTCGTTTCATCTTTGCGCGGCTGCTCAACATCGATGGCGAAAAGCTGCACCTGCTGCCGCTTGGAGCCGGTCAGCGCCAGCAGGTGGTGAGCAACCCGCCATGGGCCGCGGTCGCGGTCCGCCTCATCCGGACGCTTTGA
PROTEIN sequence
Length: 126
VQLPQDTQLAITALLGADGAHAPTRVEQALTARPTEDMIAMRVTSSIGDYRAGDEIWCRKVEGDWTSALNRDLLVPRPAGRFIFARLLNIDGEKLHLLPLGAGQRQQVVSNPPWAAVAVRLIRTL*