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scnpilot_p_inoc_scaffold_40714_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1598..2806

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle protein Srp54 n=1 Tax=Thiobacillus thioparus RepID=UPI00036FA614 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 398.0
  • Bit_score: 739
  • Evalue 2.00e-210
signal recognition particle subunit FFH/SRP54 (srp54) similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 398.0
  • Bit_score: 716
  • Evalue 3.90e-204
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydroge similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 398.0
  • Bit_score: 716
  • Evalue 2.00e-203

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGGAAATGATTCAGTTCATCGAAGCGGTCAAAACCCGCGCCCTGGGCCAGGAAGTGCTCGCCAGCCTGTCGCCGGGCCAGGCGCTGATCGGCATCGTCCACGAAGAGCTCACCCGCCTGATGGGCGGCGAGAACGCGGAACTGAATCTGGCCGCCACGCCGCCTGCGGTGATCCTGATGGCCGGCCTGCAAGGCTCGGGCAAGACCACCACCAGCGGCAAGCTGGCGCTGCTGTTGAAAAACCGCAAGAAAAAAGTCCTGCTCGCCTCCGCCGACGTCTACCGTCCCGCCGCCATTGACCAGTTGCGGCAACTCGGCAAGCAGCTCGACGTCAGCTTTTTTGAAGCCGGCGACGAACGCGATCCGCTGAGAATCGCACGGGCCGCGCAGGACCATGCGCGCAAGCAGTTCTATGACGTGTTGATCGTCGACACCGCCGGCCGGCTGGCGATCGACGAAGCGATGATGGCCGAGATCAAGGCCCTGCACGCCGCGGTCAAGCCGGTTGAAACCCTGTTCGTGGTCGACGCCATGCAGGGCCAGGACGCGATCAACGTCGCCCGCGCCTTCAACGAAGCGCTGCCGCTCACCGGCGTGGTGCTCACCAAGCTCGACGGCGACGCCCGCGGCGGCGCGGCGCTGTCGGTGCGCCACATCACCGGCAAACCGCTCAAGTTCATCGGCGTCGGCGAAAAATCCACCGGACTGGAAGCCTTCCACCCCGAACGTATGGCGCAGCGCATTCTCGGCATGGGCGACGTGCTGTCGCTGATCGAGCAGGCGCAAGGTTCGGTCGACCTCGCCGAAGCGAAAAAACTCGCCGACAAGGTCAAGAAGGGCAAGGACTTCGACCTCGAAGATTTCAAGACGCAAATCCAGCAGATGCGCAAGATGGGCGGATTGTCCGCACTGATGGACAAGCTGCCAGGCGCCGGCCAGATGCCGATCCCGGCCGGCGCCGACGACAAGGCCGTCAACCGGGTGGAGGGCATCATCAACAGCATGACCCCGCTGGAGCGCCGCAAACCCGACATCATCAAGGCCAGCCGCAAGCGCCGTATCGCCGCCGGCGCGGGGGTGCAGGTGCAGGAGGTCAACAAACTGCTGAACCAGTTCGAGCAGGCGCAGAAAATGATGAAAATGATGGGCAAGGGCGGCCTGTCCAAGATGATGCGCGGCATGAAGGGCATGCTGCCCGGAATGCGATAA
PROTEIN sequence
Length: 403
MEMIQFIEAVKTRALGQEVLASLSPGQALIGIVHEELTRLMGGENAELNLAATPPAVILMAGLQGSGKTTTSGKLALLLKNRKKKVLLASADVYRPAAIDQLRQLGKQLDVSFFEAGDERDPLRIARAAQDHARKQFYDVLIVDTAGRLAIDEAMMAEIKALHAAVKPVETLFVVDAMQGQDAINVARAFNEALPLTGVVLTKLDGDARGGAALSVRHITGKPLKFIGVGEKSTGLEAFHPERMAQRILGMGDVLSLIEQAQGSVDLAEAKKLADKVKKGKDFDLEDFKTQIQQMRKMGGLSALMDKLPGAGQMPIPAGADDKAVNRVEGIINSMTPLERRKPDIIKASRKRRIAAGAGVQVQEVNKLLNQFEQAQKMMKMMGKGGLSKMMRGMKGMLPGMR*