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scnpilot_p_inoc_scaffold_40854_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(750..1607)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbA n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AA18DA similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 268.0
  • Bit_score: 398
  • Evalue 4.60e-108
Uncharacterized protein {ECO:0000313|EMBL:EQB00443.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 268.0
  • Bit_score: 394
  • Evalue 9.30e-107
conjugal transfer relaxase TraA similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 268.0
  • Bit_score: 368
  • Evalue 2.40e-99

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
CTGGCAATGTTCATTCACCGACATAGCGATGGCAAGGCGCAGTTCGATCAGGCGATAGGCGCCGTACGATCCAGCCCTGAACTGGTGGCATTGGGGACGGATGGAAAAGGCCAGGCGCGGTTTACCTCGCGCGACATGATCGCGACCGAGCAGCGGTTGGATCGTGCCGCCGATCGGCTTGCTGCCTTGGCTCGTCACGCTGTCGATGATCAGGCGCGTACCGATGCTTTGGCAAAGGCTGAAGAGAGCGGGCTGGTCCTGTCGACTGAACAGCGTGGCGCACTGGAGCATGTTACCGGCAGCAACGGGCTGGCTTCGGTAATCGGCTATGCCGGGACGGGCAAATCAGCGATGCTGGGCGTGGCGCGGGAGGCGTGGGAGCGTGCTGGCTATCAGGTGCGTGGCGCAGCCCTTTCGGGGATCGCGGCGGAAAGTCTGGAGAGCGGATCGGGCATCGCCTCACGAACGATCGCCGGGCTTGAATATCAGTGGAGCCAGGGTCGCGAACAGCTCGGCCCGCTTGATATCCTCGTGATCGATGAAGCAGGGATGGTCGGTACGCGCCAGATGGAGCGTATATTGTCCCAGGCTACCATCGCAGGTACCAAAGTGGTACTAGTCGGCGATCCCCAGCAATTGCAGGCGATCGAGGCAGGCGCCGCGTTCCGTGGTCTTGCCGAGCGGCATGGCTGGGCCGAAATTGGCGAGATACGCCGCCAGCGCGAAGAATGGCAGCGGGACGCGACCAAAGGAAGATATGCCCATGAAATACAGAGAACTTGGCAACACGGGCCGGAAGGTTTCCGAAGTGGGGTTCGGGGCCTGGGCCATTGGTGGGTCATGGGGCGACGTCTCTGA
PROTEIN sequence
Length: 286
LAMFIHRHSDGKAQFDQAIGAVRSSPELVALGTDGKGQARFTSRDMIATEQRLDRAADRLAALARHAVDDQARTDALAKAEESGLVLSTEQRGALEHVTGSNGLASVIGYAGTGKSAMLGVAREAWERAGYQVRGAALSGIAAESLESGSGIASRTIAGLEYQWSQGREQLGPLDILVIDEAGMVGTRQMERILSQATIAGTKVVLVGDPQQLQAIEAGAAFRGLAERHGWAEIGEIRRQREEWQRDATKGRYAHEIQRTWQHGPEGFRSGVRGLGHWWVMGRRL*