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scnpilot_p_inoc_scaffold_41296_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(390..779)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=2 Tax=Hordeum vulgare var. distichum RepID=F2E571_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 109.0
  • Bit_score: 212
  • Evalue 2.10e-52
Predicted protein {ECO:0000313|EMBL:BAJ99955.1}; Flags: Fragment;; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 109.0
  • Bit_score: 212
  • Evalue 3.00e-52
50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 103.0
  • Bit_score: 112
  • Evalue 1.10e-22

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Taxonomy

Hordeum vulgare → Hordeum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 390
ATGGCCGCACACGTCACTGTCAGAGGAGACAAGGCTGATGAAATTCTCGAAAGAGGACTTAAAGTCAAGGACAGAGAATTGAGAAAAGTCAACTTCTCAGATACTGGATGTTTCGGTTTCGGTATTCAAGAACACATTGATTTGGGTATCAAGTATGATCCATTCACCGGTATTTTCGGTATGGACTTTTACATTGTCCTCAAAAGACCAGGAAGCAGAGTTGGTTTGAGAAGAAGATGCAAATCAAGAATCGGAGCCAAGCATAGAATTTCAAAGGAAGATGCCATGGAATGGTTCAGAAGAAAATATGACGGTGCCATTTACAACTGATTGATTCATAAAATATTTAAACTTTGAGATTTTTCCTTAATTTATGTAGTTCTAAAATAA
PROTEIN sequence
Length: 130
MAAHVTVRGDKADEILERGLKVKDRELRKVNFSDTGCFGFGIQEHIDLGIKYDPFTGIFGMDFYIVLKRPGSRVGLRRRCKSRIGAKHRISKEDAMEWFRRKYDGAIYN*LIHKIFKL*DFSLIYVVLK*