ggKbase home page

scnpilot_p_inoc_scaffold_41315_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 539..1228

Top 3 Functional Annotations

Value Algorithm Source
Putative signal peptide cub domain protein (Fragment) n=1 Tax=Ixodes ricinus RepID=V5HKT5_IXORI similarity UNIREF
DB: UNIREF100
  • Identity: 24.6
  • Coverage: 191.0
  • Bit_score: 67
  • Evalue 1.50e-08
Putative atp synthase subunit a {ECO:0000313|EMBL:JAB84356.1}; Flags: Fragment;; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 199.0
  • Bit_score: 71
  • Evalue 1.40e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ixodes ricinus → Ixodes → Ixodida → Acari → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 690
TTGAGATCATTCATCTTCATCTTAAGAGTCGCTTCTGATTTCAAACCCAAGTCTGTTTTTAGGTTTTTCTTCAACTTTTGGCAACTGTTCTCCTTATTTGACTTATTCTTCTTTCTCCTTTATTTCTTCTTATTATTCTTTCTCATCAACTTCCTTTATTTCTTTTGATTTCAACTTCTTCTACTCTTTCTTTTTCTGCATTTATTAGTTAAATTTTTGTTTATACTCTTAGCCATCAAGAATGTATTTCTTTTTGACTTTGTGTTCTGTAATAAGAATTTCCTTAATTTATTCAAAAAATTATCCTTGGATTTGAGCCACACCTTCTTATACAGCACTGCAAGAACAAGCAAACTTTTTACTACATTTTTTAGAAAATTATTTTGCATCGATTCCAAAAATTCCCAAGCCAGAAATTGTTGTCACATATTTATGTTTACCTCTGCTTTTAGTGTCAATAACAACGTATTTGTCTTTCACAGTCTTTTCTTTCTTTTCTTACTTTGAAGCTTCTTCTTTTTTAGCTTCCTTAATTTCCTTCTTGATATTTGTGATATCTTCTTCTTTGAAATCTGGATGATATTTTGTGACTTTTGTTGGAGCCAGTTCATAAAGTACTTTGATGCAAAGATTTGGGTTTTTACCGTACTTGCAAAGTTCGAAGGGGAAACTGCATGCTGAGATAATTAA
PROTEIN sequence
Length: 230
LRSFIFILRVASDFKPKSVFRFFFNFWQLFSLFDLFFFLLYFFLLFFLINFLYFF*FQLLLLFLFLHLLVKFLFILLAIKNVFLFDFVFCNKNFLNLFKKLSLDLSHTFLYSTARTSKLFTTFFRKLFCIDSKNSQARNCCHIFMFTSAFSVNNNVFVFHSLFFLFLL*SFFFFSFLNFLLDICDIFFFEIWMIFCDFCWSQFIKYFDAKIWVFTVLAKFEGETAC*DN*