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scnpilot_p_inoc_scaffold_42104_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..755)

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma-54 specific transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXX3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 251.0
  • Bit_score: 493
  • Evalue 1.20e-136
  • rbh
Two component sigma54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:ADO32562.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 251.0
  • Bit_score: 493
  • Evalue 1.70e-136
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 251.0
  • Bit_score: 370
  • Evalue 4.30e-100

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Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGAACACGGTTCTGGTTATCGAAGACGACGCGATCATGGGCGAGTCGCTGGTCCAGCGATTCGAGTGGGAGGGACTGCGGGTGCACTGGTGCAGGCGACTGGCCGAGGCACGCGAGCCGCTGGACCGGCATCCGTCGGCCATCGTGAGCGATGTGCGCCTGGCGGACGGCCTGGCCACGGAATGGTTTGTGGAGCTGCCCGCCAGCCTTCGGGCCTTGCCTTGGTTTTTCCTCACCGGCTATGGCAGCGTCAACGACGCGGTCACTGCCGTGAGAGCGGGTGCCAGGGAATACCTCACCAAACCTTTTGACATCGAAAACCTGGTGGCCATGGTGCACGCGGCGGTGTCGGTGGCGCCGAGCGCAGAAGACACTGCGGTGCTGGGCGTTTCGCCCGCCATGCGACGCGTCGAGGCCATGGTGCACAAAGTGGCGGGCCAGCGTGTGTCCACCTTGCTCACGGGAGAGTCCGGGGTGGGCAAGGAGGTTGCCGCCCAGCTGATCCACCAGCTGGATCCGCGCAGCGGGAGGGGCGAGTTTGTGGCGGTCAACTGCGCCGCCATCCCCGAAACCATGATGGAGGCCGAGTTTTTTGGCTATGAGAAGGGAGCATTTTCTGGCGCTATGCGTGCGCACAAAGGCTATCTGGAGCGCGCCAACGGCGGGACCCTGTTCCTCGATGAGGTGGGGGAGTTGCCAGCCAGCATGCAAGCCAAGCTGCTGCGGGCCTTGCAGGAGAAGTGCTTTTTCAGG
PROTEIN sequence
Length: 251
MNTVLVIEDDAIMGESLVQRFEWEGLRVHWCRRLAEAREPLDRHPSAIVSDVRLADGLATEWFVELPASLRALPWFFLTGYGSVNDAVTAVRAGAREYLTKPFDIENLVAMVHAAVSVAPSAEDTAVLGVSPAMRRVEAMVHKVAGQRVSTLLTGESGVGKEVAAQLIHQLDPRSGRGEFVAVNCAAIPETMMEAEFFGYEKGAFSGAMRAHKGYLERANGGTLFLDEVGELPASMQAKLLRALQEKCFFR