ggKbase home page

scnpilot_p_inoc_scaffold_42270_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1251..1565)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 104.0
  • Bit_score: 169
  • Evalue 3.00e-39
DNA-directed RNA polymerase subunit beta' n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9J7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 104.0
  • Bit_score: 169
  • Evalue 2.20e-39
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 104.0
  • Bit_score: 169
  • Evalue 6.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CCGCTGGTCTGCACGGCCTTCAATGCCGACTTCGACGGCGACCAGATGGCGGTGCACGTGCCGCTGTCGCTGGAAGCCCAGCTCGAAGCCCGCGTGCTGATGATGTCGACCAACAACATCCTGCATCCCGCGTCCGGCGCGCCGATCATCGTGCCCTCGCAGGACATGGTGCTGGGCCTCTACTACCTCTCGATCGTCAACCAGAACGAGCCGGGCGAGGGGATGATGTTCGCCGACATGGGCGAGCTGCGGGAGTGGATGCGCGACCGCCCGTTCGAGGCGACGACCCTCGCAACTTTCAGGACCTCATTCTGA
PROTEIN sequence
Length: 105
PLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMMFADMGELREWMRDRPFEATTLATFRTSF*