ggKbase home page

scnpilot_p_inoc_scaffold_42446_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1228)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029B4BD8 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 405.0
  • Bit_score: 552
  • Evalue 2.70e-154
  • rbh
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 389.0
  • Bit_score: 290
  • Evalue 7.10e-76
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB75953.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 389.0
  • Bit_score: 290
  • Evalue 3.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1227
ATGACCGTGCGTTCCTTCCGTGATCCAGAAGATGAGACGTCGTCCTCGCCCCGACCGACGCGTGCGCGCCTCGTGGTCCTGGTTCTGCTCTGCCTGCTTTCGGGAATCCTGTACCTGGACCGGATCTGCATGTCCGCGGCCATCGACTCCATCCAGTCGGATCTGGAACTGACCAACACGGAGACCGGCTACGTCCTGATGGCCTTCACGCTGGCTTACGGGCTGTTTGAGATCCCGACCGGCCGTTGGGGAGACCGAATCGGCGCGCGTCGGGTCTTGACCCGAATCTCGCTCTGGTGGTCGGCCTTCACGGCGATGACCGGCGCCTGCACGGGGCTCTGGTCGATGTTGACGGTGCGGTTCCTCTTCGGCGCCGGCGAGGCGGGCGCCTTCCCGAACGTCGCTCGGGTGCTGGCGAAGTGGTATCCGGACCACGAGCGCGGCCGGGCCCAGGGGTTGCTGCTCGCGGCCTCGCAGGTCGGTGGTTCCGTGGCGCCCTTCCTGGCCGCGGTGATGATCCAGGCCATTGGATGGCGCTGGACGTTTTCCGTATTCGGAGCCCTGGGGACCGCCTGGGCGGCCGGGTTCTGGTGGTGGTTCCGTGACGACCCCGCGGCCCACCCGGCCGTGAACGCCGTCGAGCGGGAGTACATCGGCCGACACGCCGCATCCGCGCCCGTGCATGATCCGATTCCCTGGGCGCTGGTCGCCCGAAACTCCAGCATCCGCGCCCTCGGGCTGATCATGGCGCTCGGTTCCTTCAACAGCTACATCTACTTCTCCTGGTATCCGAAGTACCTCAAGGACGGGCGAGGCATCGACCCGACCGAGGCCGGCCTGATGGCCTCGATGGTGCTCGCGTTCGGGGCGATCGGCACGTTCGTCGGCGGCCTTCTCGTGGATCGGTTCGTGGCGCGAGGCGCCGAGACGAAAGGTCGTCGCGTCCTCGGGGGTATGGCCTTCTTCGCCGCCTCAGCCATGCTCGGCTGCGCCCTCGGGGTCCGCGCCCCCTGGATTGCGGCGAGCTTCACGGCGCTGTCGTGCCTGGCGTCGCAATCGGCCCAGCCGCTGTGGTGGTCGTGCGCGATCGGGGTGAGCGGTCGTCACATCGGCGCCCTCTTCGGCTTGATGAACATGGTGGGCGTCTTCGGCGCGATGAGCTCGCAGTATCTGGTGGGGGCGATCGCCGACACCATGGGCGCCCAGGGCTATTCCGGGCGCGCGCAG
PROTEIN sequence
Length: 409
MTVRSFRDPEDETSSSPRPTRARLVVLVLLCLLSGILYLDRICMSAAIDSIQSDLELTNTETGYVLMAFTLAYGLFEIPTGRWGDRIGARRVLTRISLWWSAFTAMTGACTGLWSMLTVRFLFGAGEAGAFPNVARVLAKWYPDHERGRAQGLLLAASQVGGSVAPFLAAVMIQAIGWRWTFSVFGALGTAWAAGFWWWFRDDPAAHPAVNAVEREYIGRHAASAPVHDPIPWALVARNSSIRALGLIMALGSFNSYIYFSWYPKYLKDGRGIDPTEAGLMASMVLAFGAIGTFVGGLLVDRFVARGAETKGRRVLGGMAFFAASAMLGCALGVRAPWIAASFTALSCLASQSAQPLWWSCAIGVSGRHIGALFGLMNMVGVFGAMSSQYLVGAIADTMGAQGYSGRAQ