ggKbase home page

scnpilot_p_inoc_scaffold_41916_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(721..1356)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 210.0
  • Bit_score: 240
  • Evalue 1.50e-60
Uncharacterized protein {ECO:0000313|EMBL:GAO42081.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 194.0
  • Bit_score: 250
  • Evalue 1.60e-63
outer membrane lipoprotein carrier protein LolA similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 210.0
  • Bit_score: 240
  • Evalue 4.40e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 636
ATGCGTAACCTTATTCTCATTTGTGTTTTAATAATGGCAGCCTTCCATGTCAGCGCCCAGTACCCGGGTTATACGGCGATAAAAGATATCAACGCTTTTCAAACAGGTTTTGCCGCCGCCTCTCAAAAGACCACTTCCATCAAAAGTGATTTTGTACAGGAGAAAAACCTCAGCCTGCTTGCGGATAAGATCGTTTCCAAAGGAAAGTTCTGGTTTAAAAAAGAGAATATGGTGCGCATGGAATACACCCAGCCTTTTCAGTATCTTATGATCATTAACGGGCAGAATATTTATGTAAAAGACAGCCAGAAGGAAAACAAAATATCTGCCAAATCCAATAAGCTGTTCCAGCAGATCAATAAAATAATTATAGATTGTGTGAAAGGAGAGGCTTTAGAAAGCGGGGACTTCAATACAAGGATATTTGAAGGAAAGGAAAGCTACCTGGCAGAGCTCAGCCCTGTGAATAAAAACCTGCAGGCGCTTTTCAAAAACATTAATGTGATTGTAGAAAAGAAAAATTATGAAGTTACCGGCATCGAAATGCATGAGCCTTCCGGTGATAACACGATCATACATTTTAATAACAGGCAATTGAACACTACACTCCCAGATGCGCTTTTTGCTGTTCATTAG
PROTEIN sequence
Length: 212
MRNLILICVLIMAAFHVSAQYPGYTAIKDINAFQTGFAAASQKTTSIKSDFVQEKNLSLLADKIVSKGKFWFKKENMVRMEYTQPFQYLMIINGQNIYVKDSQKENKISAKSNKLFQQINKIIIDCVKGEALESGDFNTRIFEGKESYLAELSPVNKNLQALFKNINVIVEKKNYEVTGIEMHEPSGDNTIIHFNNRQLNTTLPDALFAVH*