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scnpilot_p_inoc_scaffold_44312_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(736..1506)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 256.0
  • Bit_score: 463
  • Evalue 1.90e-127
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM43_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 256.0
  • Bit_score: 463
  • Evalue 1.40e-127
23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 257.0
  • Bit_score: 446
  • Evalue 4.80e-123

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
GCCGCCGACATCCCGCAGATCGAATTCGCCGCGGGCGACGACACGGTGGCGCTGGTGTTCCGCCACATGCAGCCCTTGAGCGAACGTGACCGCGAGGCGCTGACCGCGTTCGGCCAGACGCATGGTTTCGCGATCTACCTGCAGCCGGGCGGCGTGAGCAGCGTGCACCCGCTGTGGCCGGAGGCGCCGCGGCTGGCGTTCAAGCTGTCGCCGGGCGGCGGTGCGCAGGATGTCGAGCTGGAGTTCCAGCCGCTGGATTTCGTGCAGGTCAACGCGGGCATGAATCGCCGGATGATGGCGCGGGCGATGGAACTGCTGGACCCGCAACCCACCGACCGCGTGCTCGACCTGTTCTGCGGGCTGGGCAACTTCACCTTGCCGATCGCGCGCCGGGTGGCCGAGGTGGCGGGCGTGGAGGGCGAGCACGGCCTGGTGGCGCGCGCCGCGGACAACGCACGGCGCAACGGCATCGCCAACGCGGGTTTCCATGTCGCCAACCTGTTCGAGGACCAGCGCGGCGCCGAGTGGGCGCGCCAGCCCTGGGACAAGCTGCTGCTGGACCCGCCGCGCGCCGGCGCCGACCAGGTGCTGGCCTATCTGCCGCACAGGGCCACGCGGCGCATCGTCTATGTTTCCTGTCATCCGGCCTCGCTGGCGCGCGATGCCGGCATCCTGGTCAACCAGCACGGCTTCAGGTTGGGTGCGGCGGGCGTGATGGACATGTTCCCGCACACGGCGCATGTCGAATCCATTGCCGTGTTCGAGAGGTGA
PROTEIN sequence
Length: 257
AADIPQIEFAAGDDTVALVFRHMQPLSERDREALTAFGQTHGFAIYLQPGGVSSVHPLWPEAPRLAFKLSPGGGAQDVELEFQPLDFVQVNAGMNRRMMARAMELLDPQPTDRVLDLFCGLGNFTLPIARRVAEVAGVEGEHGLVARAADNARRNGIANAGFHVANLFEDQRGAEWARQPWDKLLLDPPRAGADQVLAYLPHRATRRIVYVSCHPASLARDAGILVNQHGFRLGAAGVMDMFPHTAHVESIAVFER*