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scnpilot_p_inoc_scaffold_44316_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1057..1506

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MX96_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 305
  • Evalue 3.60e-80
  • rbh
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 305
  • Evalue 5.10e-80
TraR/DksA-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 150.0
  • Bit_score: 285
  • Evalue 8.40e-75

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGCATCGGTCCTGAATTCCGATAAAGACGGCGACAAGCCGCCCAAATCGACTGTCGAACTTCCTGCAGACTACCGGCCTTCCGCCGATGAGGAATTCATGAACCCGTTGCAGCTGGAATATTTCCGGCAGCGCTTGTGGGACTGGAAAAAGCAGATCCATGCCGAAGCCGAAGGGACGCTTGCCGTCCTTCAGAATGAGCCGCTTCGCGAACCCGACCTGAACGACCGCGCATCGAGCGAGACCGACTGGTCGATCGAACTGCGCACCCGCGACCGCCAGCGCAAGCTGATCTCCAAGATCGAGGCAGCGCTTCGCCGGATCGAGGACGGCGAATATGGTTATTGCGAAGTCACCGGCGAACCGATTTCGCTGGGTCGGCTGGAGGCCCGGCCGATCGCGACCATGACGGTCGAGGCGCAGGAACGGCATGAGCGGCAAGAGAAGATT
PROTEIN sequence
Length: 150
MASVLNSDKDGDKPPKSTVELPADYRPSADEEFMNPLQLEYFRQRLWDWKKQIHAEAEGTLAVLQNEPLREPDLNDRASSETDWSIELRTRDRQRKLISKIEAALRRIEDGEYGYCEVTGEPISLGRLEARPIATMTVEAQERHERQEKI