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scnpilot_p_inoc_scaffold_44340_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1177..1506)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI000348CAD4 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 82.0
  • Bit_score: 77
  • Evalue 6.90e-12
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 93.0
  • Bit_score: 73
  • Evalue 3.60e-11
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CBH50406.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ( similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 93.0
  • Bit_score: 73
  • Evalue 1.80e-10

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Taxonomy

Rhodococcus equi → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
CGGATCGGCATGCGCTCGGGCAACTTCGAGTTCATCCGGTGCCTCGTCGGGCGCGGGGTCGGCTACGCGTTCCTGATCCAGCGACCGGCGTCGGACCTGACGTTCGAGGGCAAGCGGGTCGTGGTGAAGGCGATCCGCGAGCCCATGCCGACGACGCCGGTCGTGCTGGCCTACGCGAAGGATGCGCGGCTGTCGCCGCGGGCGATCAGCTTCATCGAGTTCGCCGTGAAGGATCGCCGCGCGCGGCGGCGCCTGCCCGGCGACGCGGCCGACCATGCCGAGGGTCAGCTGGCCGGAGCCGGGCAGGCCGCGGGAGACGGCCGGAATTAG
PROTEIN sequence
Length: 110
RIGMRSGNFEFIRCLVGRGVGYAFLIQRPASDLTFEGKRVVVKAIREPMPTTPVVLAYAKDARLSPRAISFIEFAVKDRRARRRLPGDAADHAEGQLAGAGQAAGDGRN*