ggKbase home page

scnpilot_p_inoc_scaffold_44478_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(330..1328)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Streptomyces RepID=UPI0003731DB8 similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 336.0
  • Bit_score: 163
  • Evalue 4.90e-37
Transcriptional regulator {ECO:0000313|EMBL:AKH83453.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 336.0
  • Bit_score: 163
  • Evalue 6.90e-37
putative LacI-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 337.0
  • Bit_score: 156
  • Evalue 1.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sp. CNQ-509 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAGCACAAAGCGAAAGACAACAATTCGAGATGTGGCCGCGGCTGCCGGTGTGTCGGTAACGACGGTTTCCGATGCGCTTTCGGGCAAGGGTCGACTCCCTGAGGAAACGCGGCGCAGAGTGCAGTCCGAAGCAGAAAAATTGGGCTATCGGCCGAGTGCGATTGCTTTGGGACTGCGCGAGCGCGGACTCGGGCTTGTGGGGCTATGCATCACCCCCGCAGGCGAGGCCATTCTGACCGATGTCGGATATTGGGCAACGATCGTCACCCACGCCAGCCAGACTCTTCTCTCGGAAGGCCTGGCACCGGTATTGCTGCCGCATAATGTCGACCTGCTCAGCACGTTGAAGGTGCCGCTCGACGGCGCCATCGTTGTCGATCCACTGGAAGGCGATCCAGTCTTGACATTTTTTGAACGAAACAGAGTTCGCTACATCACCATCGGCCGGGACTTGACGCGCGACAATCGGTCCTGGCTGGACGACGACAACGCAAACGGGCTCCTGCGACTCCTCCAGCGTACTGTTCCGGCCCGAACAAACGTCGCATTCGTGACGATTGGTCCGTTGAAAAGTTATGTCGTCGATGCGCTCAATGGCGCGAACCAGTGGGCGAGGGGGAGTGACTCATCGATCAGGATCTTCCACGCCGAAAGCTCGGATCGTGCAGATATCGGTCATGTTGTTTCCAGCGCATTGGGGCAGGGTTTCGGCGCGATCGTCGCGCAGCACGATCGGCTCGCTCTCCATCTGCTTTCTGCAATGACAGAGCGCGGGATCGAGGCCCCAAAGGACGTAAGGCTGATCTCAGTCACTGACTCCCCCGACTTGGAGAGCGCATCGACGCCCATATCAGCCATCCGTCAGCGCCCTGCCCAACTCGCGGAATTGACTGCACGGGGCATCATCGAAATGATCAGGGGCAAGCCTGATATCGAAAAGACGCTTTTGCCCTTGGAAATTGTAATACGAAAATCAGCGCCCTCGATAGTCGGTTGA
PROTEIN sequence
Length: 333
MSTKRKTTIRDVAAAAGVSVTTVSDALSGKGRLPEETRRRVQSEAEKLGYRPSAIALGLRERGLGLVGLCITPAGEAILTDVGYWATIVTHASQTLLSEGLAPVLLPHNVDLLSTLKVPLDGAIVVDPLEGDPVLTFFERNRVRYITIGRDLTRDNRSWLDDDNANGLLRLLQRTVPARTNVAFVTIGPLKSYVVDALNGANQWARGSDSSIRIFHAESSDRADIGHVVSSALGQGFGAIVAQHDRLALHLLSAMTERGIEAPKDVRLISVTDSPDLESASTPISAIRQRPAQLAELTARGIIEMIRGKPDIEKTLLPLEIVIRKSAPSIVG*