ggKbase home page

scnpilot_p_inoc_scaffold_42858_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 136..1242

Top 3 Functional Annotations

Value Algorithm Source
RND efflux membrane fusion protein n=1 Tax=Pseudomonas aeruginosa CF27 RepID=U9R320_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 366.0
  • Bit_score: 411
  • Evalue 6.70e-112
  • rbh
mexH; RND efflux membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 365.0
  • Bit_score: 411
  • Evalue 3.20e-112
Putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein {ECO:0000313|EMBL:CDH75188.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 365.0
  • Bit_score: 411
  • Evalue 1.60e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAACGCCCGTTTTGCTTTTCTTGGCCTGGCACTGGCGAGCGCGATCGGCCTGTCCGCATGCTCATCGGGCTCGGATGGCGCAGGTGGCTGGCCGGCCACCAAGGTGGCGTTGGCGCCGGTAGAGCGCGCCCGGGCGCCGCGCACGTTCCACGGCGTGGGCGAACTGGAGGCGGCGCGGCAGGTGGAACTGGCTGCGGAAACCGCGGGGCGTGTGACGCGCATTGCGTTCACCTCCGGGCAGCGGGTGAAGCAAGGGGAACTGCTGGTGCAGCTCAACGATGCGCCCGAGCAGGCCGAGCGTCTTCGGCTGCGCGCACAGTTGCGCAATGCCGAGACCGTGCTGGCGCGCACTCGTCGGTTGATGGCCGACAAGGTGGCCACGCAGGAGCAACTCGACCATGCACAGGCTGCACGCGACATGGCGCAGGGCGAACTGCGCGGGATCGAGGCGGTCATCGCGCAGAAGGCGATCCGTGCGCCGTTCGCGGGCACGATCGGCATTCGCCGCGTGCACGAGGGACAGTACCTCGCTGCGGGAGATGGCATCGCCAGCCTGGTCGATGCCGGGACCCTCAAGGTCAACTTTGCGCTGGACGAACAGGCGGTTCCGCACGTGCGGCCTGGCCAACCGGTCGAGATCCGGGTCGATGCCTGGCCGGGGCGCCGTTTCGAGGCGCAGGTGTCGGCCATCGACCCGCTGATCGGCGCGTCGCGTACGCTGCGTGCGCAGGCCAGCCTGCCCAACGTCGACGGCGCGCTGCAGGCCGGCATGTTCGCCAACGTGCGCGTGCTGCGCGAGCAGCCCACGCCGGTGCTGGCGGTGCCCGAAACTGCGGTGACCTACACCGCCTACGGCCAGACGGTGTTCGTCGCCGAAGCCGCAGAACCGCAGGGAATGACCGTGCGCCGCGTCGCGGTGAAGACGGGCGAGCGCTGGGACGGCCGGGTCGAGATCGTCTCCGGCCTGAAGGAAGGCGACCGGGTGGTGGTGTCCGGCCAGCTCAAGCTCAGCGACGGCATGCCGGTCGAGCCGGTCGCACGCGACGCCCTGCACGGGGACGCTGCCTCGCCCCAGGCGAAGACGGCCCGGGAGCAGGCGACATGA
PROTEIN sequence
Length: 369
MNARFAFLGLALASAIGLSACSSGSDGAGGWPATKVALAPVERARAPRTFHGVGELEAARQVELAAETAGRVTRIAFTSGQRVKQGELLVQLNDAPEQAERLRLRAQLRNAETVLARTRRLMADKVATQEQLDHAQAARDMAQGELRGIEAVIAQKAIRAPFAGTIGIRRVHEGQYLAAGDGIASLVDAGTLKVNFALDEQAVPHVRPGQPVEIRVDAWPGRRFEAQVSAIDPLIGASRTLRAQASLPNVDGALQAGMFANVRVLREQPTPVLAVPETAVTYTAYGQTVFVAEAAEPQGMTVRRVAVKTGERWDGRVEIVSGLKEGDRVVVSGQLKLSDGMPVEPVARDALHGDAASPQAKTAREQAT*