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scnpilot_p_inoc_scaffold_46809_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..1112)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X269_DESRD similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 358.0
  • Bit_score: 205
  • Evalue 7.40e-50
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RBG_13_WOR-2_44_8b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 370.0
  • Bit_score: 217
  • Evalue 4.50e-53
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 358.0
  • Bit_score: 205
  • Evalue 2.10e-50

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Taxonomy

RBG_13_WOR-2_44_8b_curated → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCAAGTCTACAAGTACGTAGGATTCGACACGACGGGCCGACGCATCACCGGCGAACTCTCTGCTACGTCATCGTCTCATGCGGAAGAGATATTGGAGTCTCGGTCGGTCATTCTTCTTTCCATTGAAGGAGGCGGCGGTCAGGAGACGGTCGTTTCTCGACCTCGGCTCAGACTCAATCTTCCCAAGAGTTCTCATCGCCCCGTTAAGACGATGGACGCAGCGATCATCCTGCGTAACCTAGCCGTCATGACGGAGAACGGAGTGACTTTGGTGGATGCACTAGACGGCGTGATCGATTCCATTCGAAACGATGAGATTAAGGAGAAACTGAGTCGAGTTCGAGCCGATATCGTGGGAGGAAAGAGCCTCTCCAGCGCCTTGAGATCCGAGACCGGGCTCTTCCCTTCGCTTGTCTGCGACATGGCCCGAGTGGCGGAAGACGGAGGGCAACTTGCGACGGCTCTGGGGGGAGCGGCGACTTATCTAGAGCGCGTGGCCAATCTTAGGCGGAAGATCATGAATGCCCTGCTCTATCCTTCGATCATGGCGTTTATCGCCTTTTTGACGGTGGCGATTTTGGTCATCCTGATTTTGCCCAACTTCAACGATATCTTCATTCAGATGTCCGTGGAGCTTCCCACATCAACAAAGGTGTTGATGGCGACGGGGACGTTTATGCACGACAACTTCTTCTTGTTTCTTGGACTGTTCGCAGCGGGGTGGTTTGGAATCAAGCGCTACATTCACACGGAGGTTGGCTCTCAGGTCTATTCGAGGACGCTCTTAAAGATTCCTGTGATCGGCGAATTGGTGAAGAAGCTCTCGATTTCAAGGGCGCTTCAATCGATCTCCGCTCTAATTTCGAGCAACGTTTCCCTTATTCACGCACTTGATCATGGCGCTCGAGTCGCAGGAAACTATGTGGTCAGCAGCGGACTCTTGGCGGCTAAAGACGGAGTGGAACAGGGATCATCCCTGTCCGAGGCGTTGCTCAAGTCTCCCGTCTTTCCGAAGGTTCTGACTCAGATGGTGGTGGCGGGAGAACGGACGGGCAAGTTGTCCCAGATGCTTCATCCCGTCGCTCTGGCCATGGAGGAGGAAGCAGAC
PROTEIN sequence
Length: 370
MQVYKYVGFDTTGRRITGELSATSSSHAEEILESRSVILLSIEGGGGQETVVSRPRLRLNLPKSSHRPVKTMDAAIILRNLAVMTENGVTLVDALDGVIDSIRNDEIKEKLSRVRADIVGGKSLSSALRSETGLFPSLVCDMARVAEDGGQLATALGGAATYLERVANLRRKIMNALLYPSIMAFIAFLTVAILVILILPNFNDIFIQMSVELPTSTKVLMATGTFMHDNFFLFLGLFAAGWFGIKRYIHTEVGSQVYSRTLLKIPVIGELVKKLSISRALQSISALISSNVSLIHALDHGARVAGNYVVSSGLLAAKDGVEQGSSLSEALLKSPVFPKVLTQMVVAGERTGKLSQMLHPVALAMEEEAD