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scnpilot_p_inoc_scaffold_45729_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1210)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFA727 related cluster n=1 Tax=unknown RepID=UPI0003CFA727 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 402.0
  • Bit_score: 780
  • Evalue 7.90e-223
  • rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:KHS44966.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 402.0
  • Bit_score: 780
  • Evalue 8.50e-223
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 402.0
  • Bit_score: 776
  • Evalue 4.20e-222

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGAAAATCACCTCCGCCCGCGTCATCGTCACCTGCCCGGGTCGCAACTTTGTCACGCTCAAGATCGAAACCGATCAGGGCGTCTACGGCATTGGCGACGCGACGCTCAACGGCCGCGAAAAGGCGGTTGTCTCCTATCTGGAAGACCATGTGATTCCGTGCCTTATCGGCATGGACCCGCGCAATTCCGAGGACATCTGGCAATATCTCTATCGCGGGGCGTACTGGCGCCGCGGGCCGGTCACGATGCGCGCGATTGCCGCCGTGGACGTCGCCTTGTGGGACATCAAGGCCAAGATGGCGGGCATGCCTTTGTACCAGCTTCTGGGCGGGCGCAGCCGCGATGGCGTGATGGTCTATGGTCATGCCAATGGCTCCGACATTGCCGAGACGGTTGATGCGGTTGGTCAGTATATCGACATGGGCTATAAGGCGATCCGCGCGCAGACCGGCGTGCCGGGCATCAAGGATGCCTACGGCGTGGGCCGGGGCAAGCTGTATTATGAACCGGCCGATGCGGCGCTGCCCTCGGTGACGGGTTGGGACACGCGCAAGGCGCTGAATTACGTGCCGAAACTGTTTGAAAAGCTGCGCGAGACCTATGGTTTCGACCACCATCTGCTGCATGACGGCCACCACCGTTACAGCCCCACCGAGGCCGCGCAACTGGGCAAGGCTTTGGAGCCTTACTCGCTGTTCTGGCTCGAGGATGTGACGCCTGCGGAAAATCAGGAAGCCTTCAAGCTGATCCGCCAGCACACTACGACCCCGCTGGCCGTGGGCGAGATTTTCAACACGATCTGGGACGCCAAGGACCTGATCCAGAACCAGCTCATCGACTATATCCGCGCCACCATCGTGGGCGCGGGCGGCATCACCCATCTGCGCCGCATCGCGGACCTTGCCAGCTTATATCAGGTCCGCACCGGCTGCCACGGCGCCACCGACCTCTCGCCCGTGACCATGGGCACCGCGCTGCATTTCGACACCTGGGTGCCAAATTTCGGCATTCAGGAGTACATGCGCCACACGCCCGAAACCGACGAGGTTTTCCCCCACGATTACACTTTCGATGCGGGCATGCTCTATGTCGGCGACACACCGGGCCATGGCGTCGACATCGACGAAACCCTCGCCGCCAAGTATCCTTACAAGCCCGCATACCTCCCCGTCGCAAGGCTCGAAGATGGTACCATGTGGAATTGGTAA
PROTEIN sequence
Length: 403
MKITSARVIVTCPGRNFVTLKIETDQGVYGIGDATLNGREKAVVSYLEDHVIPCLIGMDPRNSEDIWQYLYRGAYWRRGPVTMRAIAAVDVALWDIKAKMAGMPLYQLLGGRSRDGVMVYGHANGSDIAETVDAVGQYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADAALPSVTGWDTRKALNYVPKLFEKLRETYGFDHHLLHDGHHRYSPTEAAQLGKALEPYSLFWLEDVTPAENQEAFKLIRQHTTTPLAVGEIFNTIWDAKDLIQNQLIDYIRATIVGAGGITHLRRIADLASLYQVRTGCHGATDLSPVTMGTALHFDTWVPNFGIQEYMRHTPETDEVFPHDYTFDAGMLYVGDTPGHGVDIDETLAAKYPYKPAYLPVARLEDGTMWNW*