ggKbase home page

scnpilot_p_inoc_scaffold_45925_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 335..1315

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor family protein 23 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T2V0_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 326.0
  • Bit_score: 456
  • Evalue 2.80e-125
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KGY28475.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 326.0
  • Bit_score: 457
  • Evalue 1.70e-125
extra-cytoplasmic solute receptor family protein 23 similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 326.0
  • Bit_score: 453
  • Evalue 3.90e-125
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGAATCGCCGTCATTTCATCCTGTCCAGCGGCATGCTCGCCGCGGCGTCGCTTGCCCCCATGGTTCGCGCCCAGAGCGCCACTCCCTCCGGCCCCGTGTCCCTGGTCGTGGGCTTCCCGGCGGGCGGCGGCACAGACGTGCTGGCCCGGCTGCTGGGACAGAAATTCAGCGCAATGTGGGGCGTGCCCATCGTCGTCGAGAACAAGCCCGGCGCCGCCGGCGTGATTGCCGCCCGGCACGTATCCAAACAGTCCGGCGACGGCAATTCGCTGCTGGTGGCGCATGTGAACAGCCACGGCATCGGTCCCGGCCTGCGCAATGACCTGGGTTACTCGGTCGAAAAAGACTTCACACCCATCGGCCTGATCGGCAAGACCCCCACCGTCCTGGTGGGCGGGCCCAAAGAGCCCGCCAAGACCCTGAAAGAGCTGGTGGCGCTTTGCAAGGCCCAACCCGGCAGGATCGTGTTCGGCTCCGCGGGTACCGGTTCGGCCCAGCACCTGGCCCTGGAAATCTTCAAGGCCGCGTCGGGGATCGACGTCCTGCATGTACCCTACAGCGGTTCGGCGCCGCTGATGACCGATCTGATCGGAGGCCACATACAGTATGCGTTCGAAGGCCTGACGACCGCCAAGCCGCTCATCGAAAGCGGCAAGCTCATCGCATTGGCGCAAACCTTGCAGAAACGCTCCAAGAGCCTGCAGAACGTGCCCACCGTCGCGGAACAGGGCTATCCGGGCTTCGAGGCGAGCATCTGGTTCGCCCTGGTCGGGCCGGGCGGCATGACGCCCGCCATGGTGGAACGGATGAACGCCGATCTCAATAAAGCACTAAAGACGCCCGAGCTGATCGCGCGCCTGGCCCAGGCCGGCGCGGAAGACGGAGGCGGTTCCGCCGAGCGGCTGGCCGAGTTCATGCGCAGCGAGCAGGCGAAGTTCGCGAAGGTCATCCAGGACGCGGGCATTTCCGTCCAGGGCTGA
PROTEIN sequence
Length: 327
MNRRHFILSSGMLAAASLAPMVRAQSATPSGPVSLVVGFPAGGGTDVLARLLGQKFSAMWGVPIVVENKPGAAGVIAARHVSKQSGDGNSLLVAHVNSHGIGPGLRNDLGYSVEKDFTPIGLIGKTPTVLVGGPKEPAKTLKELVALCKAQPGRIVFGSAGTGSAQHLALEIFKAASGIDVLHVPYSGSAPLMTDLIGGHIQYAFEGLTTAKPLIESGKLIALAQTLQKRSKSLQNVPTVAEQGYPGFEASIWFALVGPGGMTPAMVERMNADLNKALKTPELIARLAQAGAEDGGGSAERLAEFMRSEQAKFAKVIQDAGISVQG*