ggKbase home page

scnpilot_p_inoc_scaffold_48040_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 146..787

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3535 similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 189.0
  • Bit_score: 160
  • Evalue 1.60e-36
TPR repeat-containing protein {ECO:0000313|EMBL:EEF60837.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 193.0
  • Bit_score: 157
  • Evalue 1.90e-35
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 182.0
  • Bit_score: 146
  • Evalue 6.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGGGGGCGACCGGCGTCGGCCCCCGATCCGACGTCGGGATGCGCGTCCGACGCCGGTCATCCCCTCAAGGAGGACTACGACAAGGCCATCGCCGATTATGATGAAGCCATCCGAATTCAGCCGAGATTCTCCTTCGCTTATGAGAACCGCGGCAGCGCCTGGAAATCCAGGAGGGAGTACGACAAGGCCCTCGCCGATTACAACGAGGCCGTCCGACTCGGTCCGAACGACGCCGCCGTCTATTACAACCGCGGCAGCGTCTGGAATCTCAAAAAGGCGTACGGCCAGGCCGTCGCCGACTTCGGCGAGGCCATCCGACTCGACCCGGAAAACACTCTCGCCCACAACGACCTGGCCATGATTTGCGCCTCGGCCCCCGATGGGAAGGTCCGCGACGGCAGGCGGGCCGTGGAGTCGGCCACCCGAGCTTGTGAGATCAGCAAGTGGAGAAACCCGGGCCATGTCGACACCCTCGCGGCGTCCCATGCCGAGGCGGGTGACTTCGCCGCCGCGGTGAAGTGGCAAAAGAAGGCGATCGGACTTCTGGGCCGGGCCGACAAGGCGATGATCGCCGACTTCCGTTCGCGACTGGAGTTGTATCGCGAGGGGAAGCCGTATCGCGCGGCGGGGGTGCCCTGA
PROTEIN sequence
Length: 214
MRGRPASAPDPTSGCASDAGHPLKEDYDKAIADYDEAIRIQPRFSFAYENRGSAWKSRREYDKALADYNEAVRLGPNDAAVYYNRGSVWNLKKAYGQAVADFGEAIRLDPENTLAHNDLAMICASAPDGKVRDGRRAVESATRACEISKWRNPGHVDTLAASHAEAGDFAAAVKWQKKAIGLLGRADKAMIADFRSRLELYREGKPYRAAGVP*