ggKbase home page

scnpilot_p_inoc_scaffold_49384_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(34..879)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECU8_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 281.0
  • Bit_score: 450
  • Evalue 1.00e-123
  • rbh
transposase IS204/IS1001/IS1096/IS1165 family protein similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 281.0
  • Bit_score: 451
  • Evalue 1.70e-124
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:AEI48156.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 281.0
  • Bit_score: 451
  • Evalue 8.20e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 846
TTGTTCCCTAAAAATATAGGGTCCCATCTATCCATTGATGAGACCAGTCTTTCGCATGGTGAATTATACACCATTCTTACTAACAAAGCTGCCAAAGGAGGCAAAGGGAGCATTGTGGCCATTGTAGCAGGCACCAAAGCGGAAGCGGTTATTGAAGTCATCCGCAAAATACCGGAATCTCTCCGCAAGAAAGTGTCTGAAATTACCTTGGACATGGCTGGCAGCATGACCATGATCGCTAAGAGATGTTTTCCACGCGCAGTGCGCGTTACTGACCGCTTCCATGTACAAAGGTTAGCAATGGAAGCCCTACAAGAAATCCGCATCAAATACCGCTGGGAAGCACTCGATCAGGAAAATGATGCGATTGAGCAAGCAAAAGCCTCCCAGACAGAATATCAGCCAGAAGTATTGCCCAACGGTGATACTATAAAGCAATTGTTGGCGCGAAGCAGATATGCATTATATAAAAAGCCTAATACCTGGACTAGCAGCCAGAAAGAGAGGACTCAACTGCTCTTTGAGCGCTTTCCAGATCTTAAAAAGGCATATGAGCTGGCATGGGAGCTCAGTAACATCTTCACGACCACCACCGAAAAGATATACGGGTTGACCAGATTGGCCAGATGGCATGAAAAGGTTAGGCAGTCAGGCTTCAAGTCATTCAACACCGTAGCCCGCTCGATTGAAAACCACTATAAGACAATCGTCAACTATTTTGATAACCGCAGTACCAATGCATCAGCGGAATCCTTTAATGCAAAGATCAAAGCGTTCAGGGCACAGTTCAGAGGAGTTCGAAATGTTGAATTCTTCCTTTATCGACTTACTCAGTTATATGCTTAA
PROTEIN sequence
Length: 282
LFPKNIGSHLSIDETSLSHGELYTILTNKAAKGGKGSIVAIVAGTKAEAVIEVIRKIPESLRKKVSEITLDMAGSMTMIAKRCFPRAVRVTDRFHVQRLAMEALQEIRIKYRWEALDQENDAIEQAKASQTEYQPEVLPNGDTIKQLLARSRYALYKKPNTWTSSQKERTQLLFERFPDLKKAYELAWELSNIFTTTTEKIYGLTRLARWHEKVRQSGFKSFNTVARSIENHYKTIVNYFDNRSTNASAESFNAKIKAFRAQFRGVRNVEFFLYRLTQLYA*