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scnpilot_p_inoc_scaffold_49390_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1789..2070

Top 3 Functional Annotations

Value Algorithm Source
ROK family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FD07_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 144
  • Evalue 5.10e-32
ROK family protein {ECO:0000313|EMBL:EHS49233.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 89.0
  • Bit_score: 145
  • Evalue 4.20e-32
ROK family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 4.20e-32

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
TTGGCGCAGGCGATCGTTTCGGCCGCATCGATCATCGATTTTTCCGCCGCCGTCATCGATGGCGGCTTTCCGGCCTGGGTACGGTCGCGGCTGGTGGCGGCGACCGTGGGGGCGGTCGGGCGTCTCGACCTGCAGGGTGTCATCATGCCGGAATTGCTGGAAGGCGCGGTGGGCGCGCAGGCGCGGGCGATCGGGGGTGCTTGTCTGCCGATCTTTGCCCGCTATCTCCTCGATCAGAACGTGCTTTTCAAGGAAATCGAGAGCGGCGGCGAACCGGGGTGA
PROTEIN sequence
Length: 94
LAQAIVSAASIIDFSAAVIDGGFPAWVRSRLVAATVGAVGRLDLQGVIMPELLEGAVGAQARAIGGACLPIFARYLLDQNVLFKEIESGGEPG*