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scnpilot_p_inoc_scaffold_44769_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 856..1494

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WG34_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 201.0
  • Bit_score: 80
  • Evalue 2.10e-12
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 201.0
  • Bit_score: 80
  • Evalue 5.80e-13
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ACU39798.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema. similarity UNIPROT
DB: UniProtKB
  • Identity: 31.3
  • Coverage: 201.0
  • Bit_score: 80
  • Evalue 2.90e-12

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
TTGGATTTCGCCAAAATAAAACTGGATAAAACCGATAGCCAGCCCCTTTACCGCCAACTGGCCGAGCAACTCAAAAAAGCTATCCGGCAAGGGGATTTACGTTCGGGAGAGAAATTGCCGCCCATCCGAGCCTGGAAAGAAACCCTCGCTATCAGCCCGGTTACGGCTACCCAGGCTTACGAACTGCTTGGTGAGGACGGCTATGCGGTCGGCCAGGTCGGACGCGGCACTTTTGCCCGCCTGCCCCAGCCTGACAAACCAGCCCTGGCCAGCCTCCCCCCGGCACCTCCGGCGGAAGTCCCGGCGGTCACGCCCCGCTCCACTTTCCCGGCGGCTTCTTTTGGTTTTCCCGACTACTACAAATCGAGCCGCTCGGCCCTGGTCCAGCGCGCCTCGAACGCCTCGATTGGCCGCCACCAGGGCGCGGGCGGCAGTGACCTGATAATCCTGACCAGCGGCGGCCCGGCCCAGGAGCTTTTCAAAATCGACCGCTGGAAAACAGCCATGCAGTTGGCCGGGGAAAGCCTCGAACGGGAAAGTCAGCTTTACGGCAACGCCCAGTTCCAGTACGGCTCGGCCCTGGGCGACCCCGCAACTCGCCAGTGGTTGGCCGGGTATTTATCGCGCTTTGGCTTCCAG
PROTEIN sequence
Length: 213
LDFAKIKLDKTDSQPLYRQLAEQLKKAIRQGDLRSGEKLPPIRAWKETLAISPVTATQAYELLGEDGYAVGQVGRGTFARLPQPDKPALASLPPAPPAEVPAVTPRSTFPAASFGFPDYYKSSRSALVQRASNASIGRHQGAGGSDLIILTSGGPAQELFKIDRWKTAMQLAGESLERESQLYGNAQFQYGSALGDPATRQWLAGYLSRFGFQ