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scnpilot_p_inoc_scaffold_44795_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..364

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB0C0E similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 125.0
  • Bit_score: 156
  • Evalue 1.30e-35
Putative O-antigen ligase {ECO:0000313|EMBL:GAD35600.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 120.0
  • Bit_score: 154
  • Evalue 1.20e-34
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 136
  • Evalue 6.60e-30

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 363
AACATCGCCCTCGACGATCACTACACCTCGGCGCTCAACGCCTACGCCGATCTGGTGCTGCAGGTGGGCTGGGTCGGGCTCATCCTGTTCGCCGCGATGGTGGGGATCGCGATGGTCCGCTCCTGGCTGGTCGCCGGTGAACGGCGGTCGGTCGTGTATGCGTGGACGCCGCTCATCCTCGTCGCGCTCCTCGTGGACGCGCTGTTCGAGAGTTTCGCCCTCTTCGGGCTGGGATGGCTGCTGCTCGTGGTCTGCCTGGTCCGCGCCGGCCAGTCGCGCTCGTGGCGGGAGCGGATGGACACGATCTCGTCGGCGCCGGTACTCCCGCCGGCCACGGGCGCGCGCACCGACCCCGCGTCGTGA
PROTEIN sequence
Length: 121
NIALDDHYTSALNAYADLVLQVGWVGLILFAAMVGIAMVRSWLVAGERRSVVYAWTPLILVALLVDALFESFALFGLGWLLLVVCLVRAGQSRSWRERMDTISSAPVLPPATGARTDPAS*