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scnpilot_p_inoc_scaffold_44856_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..1493)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis (EC:2.7.10.1) similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 404.0
  • Bit_score: 589
  • Evalue 6.90e-166
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABM43146.1}; EC=2.7.10.1 {ECO:0000313|EMBL:ABM43146.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 404.0
  • Bit_score: 589
  • Evalue 3.40e-165
Lipopolysaccharide biosynthesis n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA71_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 404.0
  • Bit_score: 589
  • Evalue 2.40e-165

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
GGCGAAGCGGGCGATCGTGCCTGCGCCACCGACCCCATCGACCGTAGAAACGATCGTGCCTGCACGGTAGCCACGCCGCAACCGCAGGTCACTCATCACCGCCTGCATGATCGGCGCAGGATCGGCAAGCCCCGTCGTCTCGACGACGACGCGGCGAAATGGCTCCACCTCCCCACGGCGCACCATCTCGAACATATCGGCAAGCGTCGAGACCAGATCGTCCCGTACGGCGCAGCACAGACAGCCCGAGGACAAGAGCACGGCATCTTCCGACACTTCGCGCACCAGGAGGTGATCAAGGCCGAATCGGACTTCGAGGCGATTCGCACCGCGCCCGGCACCTCGCGCCAGGTGCTGGAGAGCAAGACCATCCAGGATTACAAGGCGCAGATCAGCAAGCTCGACCAGGAATACCAGGAGGCCGCCAAGGTCTACAAGGACGACTTCCCGAAGATGAAGCAGCTGCGCGCGCAGATGGATGAGCTCAAGGGCAACATCGATGCCGAAGTGCAGAACGTGCTGGCCTCGGTGCGCAACCAGGCGCTGATGGCCAAGCGGCAAGAGAACCTGATCCGCAGCCGCCTGCAGCAGACCCGGGCCGAAATCATGTCGGCGCAAGACCGCAGCGTGGATTTCAACCTGCTCAAGCGCGAGGTGGACACGAACCGCGAGCTCTACAACGGCTTGCTCCAGCAGGTGAAGGAAGTCGGCGTGGCCGGCGGGGTGGAGACCAACAACATCCAGGTGGTGGACAAGGCCGAGGTGCCGCTCTTCCCCTACAAGCCCAAGCTGGCGCTGAACGCAGCCATCGGCCTGCTGGCGGGCATGGTGCTGGGCCTGGGCATCGTGTTCCTGATGGAATCCATGGACGACTCCATCAAGTTCGCCGACGAGGTGGAAAAGCTGCTCCAGGTGCCTCTCTTGGGCGTGATTCCCAAGGTGAAGGAAAAGACCACCAACCTGGCCAGCCTGGCGCTCTTGGTGCACGAGGACCCGCGCGGGCAGATGGCCGAGGCCTACCGCTCGGTGCGCACGGCGCTGCAGTTCTCCACGGCCGACGGCGCGCCGCGCCGCCTGGTGCTCACCAGCACGACCAAGAACGAGGGCAAATCGACCACGGCGCTGGCGCTGGCCATCAACTTCGCCCAGATGGGCGCCAAGGTGGTGCTGATCGACGCCGACATGCGCAACCCCTCGGTGCACAAGTACCTGAACCTGCCCAACACCGCCGGCCTGTCCAACTACCTCTCGGGCCACGGCAAGCCGGGCGAAATCACGCGCATGAGCGCCATCGACAACCTGATGCTGATCACTGCTGGGCCGATTCCCCCGAGCCCGGTGGACCTGCTGACCGGGCCGCGCCTGGGCGAGCTGATGGACCTGCTCGAAGTGCGCGGCGCGCAGTACATCATTTTCGACGGCCCGCCGGTGCTGGGGCTGGCCGATGCCATCGTGCTCGGCAACCAGGTGCATTCCGTGCTGTTCGTCGCC
PROTEIN sequence
Length: 497
GEAGDRACATDPIDRRNDRACTVATPQPQVTHHRLHDRRRIGKPRRLDDDAAKWLHLPTAHHLEHIGKRRDQIVPYGAAQTARGQEHGIFRHFAHQEVIKAESDFEAIRTAPGTSRQVLESKTIQDYKAQISKLDQEYQEAAKVYKDDFPKMKQLRAQMDELKGNIDAEVQNVLASVRNQALMAKRQENLIRSRLQQTRAEIMSAQDRSVDFNLLKREVDTNRELYNGLLQQVKEVGVAGGVETNNIQVVDKAEVPLFPYKPKLALNAAIGLLAGMVLGLGIVFLMESMDDSIKFADEVEKLLQVPLLGVIPKVKEKTTNLASLALLVHEDPRGQMAEAYRSVRTALQFSTADGAPRRLVLTSTTKNEGKSTTALALAINFAQMGAKVVLIDADMRNPSVHKYLNLPNTAGLSNYLSGHGKPGEITRMSAIDNLMLITAGPIPPSPVDLLTGPRLGELMDLLEVRGAQYIIFDGPPVLGLADAIVLGNQVHSVLFVA