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scnpilot_p_inoc_scaffold_50136_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(907..1365)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; PEP {ECO:0000256|HAMAP-Rule:MF_01321}; Plastid-encoded RNA polymerase subunit similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 147.0
  • Bit_score: 116
  • Evalue 2.60e-23
DNA-directed RNA polymerase subunit beta n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00035FE5E2 similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 118.0
  • Bit_score: 116
  • Evalue 2.40e-23
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 150.0
  • Bit_score: 114
  • Evalue 3.40e-23

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Taxonomy

Cyclotella sp. WC03_2 → Cyclotella → Thalassiosirales → Coscinodiscophyceae → Bacillariophyta → Eukaryota

Sequences

DNA sequence
Length: 459
CCTATTTTAGTTAGTTCTAATTATATCTTGAAATTATTTCATTTAGTTGATGAAAAAATTACATCGAGAGTAGAGGGACCTAATAGTTTATTAACACAACAACCAGTTAAAGGTAAAAATTTAAAAGGAGGTCAACGTATGGGAGAAATGGAAGTTTGGGCTATTGAAGCATATAATGCTTCTAATACAATACAAGATATGTTAGTTACTAAATCTGATGATATCTTTTTTAATTCTAATTTATCAAACACTATTGTAAATGATTCTATTTTTTATTCGTCAAATTATTCAAAAGCTGCATTAATTTTTAATTATGATTTACGTGCATTAGGTTTAGATTTGAATATAATATCTTTTGATATTATAAATTCGAAAAAATTAAATTTAAATTTACCTGAAAAAATTAAAAATATTGATTTAAATACTTCTTCTAAACTTTTATTAGAATCATTATATTAA
PROTEIN sequence
Length: 153
PILVSSNYILKLFHLVDEKITSRVEGPNSLLTQQPVKGKNLKGGQRMGEMEVWAIEAYNASNTIQDMLVTKSDDIFFNSNLSNTIVNDSIFYSSNYSKAALIFNYDLRALGLDLNIISFDIINSKKLNLNLPEKIKNIDLNTSSKLLLESLY*