ggKbase home page

scnpilot_p_inoc_scaffold_49912_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..762)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CF35_XANCA similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 245.0
  • Bit_score: 323
  • Evalue 2.20e-85
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 245.0
  • Bit_score: 323
  • Evalue 6.10e-86
TonB-dependent receptor {ECO:0000313|EMBL:AEL08506.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 245.0
  • Bit_score: 323
  • Evalue 3.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGCATCCACACAACACCAAGTTGTTCCGCTTCCGCCGCACTGCCCTGGCCGCCAGCCTGGGCCTGAGCATCGGCCTGTTCAGCGTCACCGCCTTCGCCCAGGACGCCCAGAGCGACCAGGCGCCGAGCCAGACCAAGGCCAAGGAACTTTCGGCCGTGACGGTCACCGGCTCGCGCATCCACAGCGTGGACGTGGAAACCGCCCAGCCGGTGTTCACCGTGACCCAGGCCGACATCCAGAAGACCGGCCTGGTCAGCGTCGGCGACATCCTGGCCAACCTCACGGTGGCCGGCTCCCAGACCTTCAGCAAGGCGGGCGTGCTCACTTCCAACCCCGAGCAGGGCGGCCAGTACATCAACATCCGCAACCTGGGCGAGCAGCGCACCCTGGTGCTGGTCAACGGCAAGCGCTGGGCCACCAGCCTGGCCGGCTTCACCGACCTGTCCACGATCCCGTCGGCGCTGATCGAGCGCATCGACATCCTGAAGGACGGCGCGTCCTCGCTCTACGGCTCCGATGCCATCGCGGGCGTCGTCAACATCATCCTGAAAGACCGCTATGAAGGCGCCGAAGCCTCGGCCTACTACGGCCAGAACCAGCAGGGCGACGGCACCAAGGACGCCTATTCGTTCACCCTGGGCGGCGGCAACGACAAGGCCTCGCTGGTGTTCGGCGCCAACTACACCAAGGAAGGCGCCGTCTGGGCGAAGAAGCGCAACGCCACCAGCTATACCTACGGCCCGAACCACGCCGAGGACGGC
PROTEIN sequence
Length: 254
MHPHNTKLFRFRRTALAASLGLSIGLFSVTAFAQDAQSDQAPSQTKAKELSAVTVTGSRIHSVDVETAQPVFTVTQADIQKTGLVSVGDILANLTVAGSQTFSKAGVLTSNPEQGGQYINIRNLGEQRTLVLVNGKRWATSLAGFTDLSTIPSALIERIDILKDGASSLYGSDAIAGVVNIILKDRYEGAEASAYYGQNQQGDGTKDAYSFTLGGGNDKASLVFGANYTKEGAVWAKKRNATSYTYGPNHAEDG