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scnpilot_p_inoc_scaffold_47061_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..552

Top 3 Functional Annotations

Value Algorithm Source
High-affinity zinc uptake system protein ZnuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERP3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 128.0
  • Bit_score: 181
  • Evalue 9.70e-43
Phytoene dehydrogenase {ECO:0000313|EMBL:EYR81714.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 114.0
  • Bit_score: 183
  • Evalue 2.10e-43
high-affinity zinc ABC uptake transporter, ZnuA-like substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 135.0
  • Bit_score: 151
  • Evalue 1.80e-34

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GCCGCCGGCACGCTCGCCGCGCGGGCCGAGGCGCCCGATGTGGTGGTTTCGATCAAGCCGATCCATTCGCTCGTCGCCGCGATCATGCAGGGCGTCGGCGAACCCGGCCTCATCGTCGAGGGCGCCGCCTCGCCGCACACCTATTCGCTGAAGCCCTCAAACGCGGCAGCCTTGCAGGATGCGGATGTCGTCTTCTGGGTCGGCCATGGCCTGGAAGCCTTCCTGGAAAAGCCGCTGGAAACGCTGGGCAGCAAGGCGACCGTCGTCGAGCTGGAAGATGCGCCGGGCCTCGAAAAGTCCGTGGTCGCGGCCAGCCTGTTGACGCCGGTCGATATCGAGGCGGAATACAACATGCCCGGCGGCCACTGGCATCACGGCGAGTTGCAGGCCGACCAATTACTCATCAACCGGCCGACAAGCGCCGCCTCCGGCTACCGGACGCCGATCGAGGGCCTTTACCTTGCCAGCGCAGGCGCGCATCCGGGCGGCGGCATTTCCGGCCTGCCGGGCTGGAACGCGGCCCGCCACATCCTTTCGGGAGCCAGCGCATGA
PROTEIN sequence
Length: 184
AAGTLAARAEAPDVVVSIKPIHSLVAAIMQGVGEPGLIVEGAASPHTYSLKPSNAAALQDADVVFWVGHGLEAFLEKPLETLGSKATVVELEDAPGLEKSVVAASLLTPVDIEAEYNMPGGHWHHGELQADQLLINRPTSAASGYRTPIEGLYLASAGAHPGGGISGLPGWNAARHILSGASA*