ggKbase home page

scnpilot_p_inoc_scaffold_47249_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(586..984)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C552 n=1 Tax=Pedobacter agri RepID=UPI00029A4B22 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 132.0
  • Bit_score: 156
  • Evalue 1.40e-35
Cytochrome C552 {ECO:0000313|EMBL:KIA92930.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis. similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 132.0
  • Bit_score: 151
  • Evalue 8.30e-34
cytochrome c class I similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 126
  • Evalue 4.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 399
ATGAAACGAACTTTTTTAATCCTTGGAATTACATCGGTTTTTGTAGCTACCTTATCAGCTTTTAAACCTGAGCCAAAAGCAGAACCAGCAGTGAATATTACTACTTCTGCCCTGCCTAAAATTGCTAGTACAACCATGCAAATGAGTGGCGGCGAGTTATTGATCAATAAATCAGACTGTATCGGCTGTCATCACAAAGTGAATAAACTAATTGGCCCTTCTTATACTGATGTAGCCAAGAAATATCCTAGCAATGAAAAAAACATCGCCTACTTGGCAGATAAAATTATAAAGGGCGGTTCGGGCGTATGGGGCAAAATCCCTATGACACCGCATCCTAAAGTATCTGAAAGTGATGCAAAGTTGATGGCAAAATATATCCTTTCTTTGAAGAAATAA
PROTEIN sequence
Length: 133
MKRTFLILGITSVFVATLSAFKPEPKAEPAVNITTSALPKIASTTMQMSGGELLINKSDCIGCHHKVNKLIGPSYTDVAKKYPSNEKNIAYLADKIIKGGSGVWGKIPMTPHPKVSESDAKLMAKYILSLKK*