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scnpilot_p_inoc_scaffold_47336_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1022..1429

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pedobacter agri RepID=UPI00029AF9BE similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 136.0
  • Bit_score: 217
  • Evalue 1.20e-53
regulatory protein DeoR similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 136.0
  • Bit_score: 208
  • Evalue 9.00e-52
Regulatory protein DeoR {ECO:0000313|EMBL:ACU05698.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 136.0
  • Bit_score: 208
  • Evalue 4.50e-51

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 408
ATGAAAAATATTACTGATAGGCATGAGTACATCCTCAAAAAACTAAAGGAAGATGGCAAAGTAAGCATCATCGAATTGATTGATTTGATGAAGGTTTCTGGCGTTACAATCAGAAAAGATTTGAAAATGCTGGAAGACAAAAATCTTCTTTTCAGAACTAGAGGTGGCGGGTCTATCAAAAATCCTTATGCCAGCGATAGAAGTATTTATGAAAAAGAGCTAATTAATGCTGATGAAAAGCAACGTATCGCCAAAGCAGCCCTTAAACTTATTAAAAACACCGATTCCATTACAATAGGCTCCGGTTCTACCGTTTTTGAAATTGCTAGGTTTTTAAATACATCAGAACACATTACGGTAATTACGCCTGCACTAAAAGTTGGTTTGGAATTAAGTAACAGAAACAAT
PROTEIN sequence
Length: 136
MKNITDRHEYILKKLKEDGKVSIIELIDLMKVSGVTIRKDLKMLEDKNLLFRTRGGGSIKNPYASDRSIYEKELINADEKQRIAKAALKLIKNTDSITIGSGSTVFEIARFLNTSEHITVITPALKVGLELSNRNN