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scnpilot_p_inoc_scaffold_52876_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1239

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EF7BC similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 367.0
  • Bit_score: 576
  • Evalue 3.00e-161
  • rbh
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:EYR81565.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 364.0
  • Bit_score: 570
  • Evalue 1.80e-159
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 393.0
  • Bit_score: 471
  • Evalue 2.30e-130

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GACACGCCCGATGCGCAGACCGTGGTAATCACCCTGACCGCGGCCAATTCGGAATTCCTGAACCAGGTCGCGGCGGGCTTTCTGGGCGTGATCAACAGCGATGTGGCGGCCGAAAACGGCGCCCTTGCCGATGAGACGGCGGCCGAGAAGGACACGTCCGAGACCTGGTTCCTGTCGCATTCTGTCGGCAGCGGCCCCTTCGTGCTGGCCAATTACGAGCCGAACGCCGAATTGCGGCTGAAGCGGAACGAAAACTACTGGCGCGCCAAGCCCGCGGTGCCCGAGGTGATCTTCCGCCAGGTGAAGGATGCGGTCGCGCAGGCGCAGATGCTGCAATCGGGCGAAGTCGACATCGCCATGCAGATCGACCCCGAAACCGCCAAATCGCTGGAAGGCTCGGATGCGGTGGTGGAACGGGTGCCCTCCTACAACTTCATCTACATCGCGCTGTCGCCGGGGGCGAAGGCCACGCCCATCGACATGACGCCCGACGTGCGCGAGGCGATTTCGATCGCGATCGACCGCACCGCGCTGATCGACTTCACCCTGGGCGGCGACGGGCGCGCGCTGGCGGCACCGATCCCGCTGGGCTTCCCCGGTGGCGATGGCCATCAGGTGCCCGAATACAATCCCGACAAGGCGAAAGAGATGCTGGCGGCGGCGGGGCTTGAGGCGGGCTTCACCCTGCAGACCATCTATCCCGACCTGAACGTCTATGGGGTGGATTTCAACCTGATGATGCAGAAGATCCAGCAGGATCTGGCCAAGGTCGGCATCGCGCTGGACCTGCAGCCGGTGCCCTTCGCCAACTGGCGTGAAATCGCGAATGGCGACCATATCCCGCTGACTGCGGTGTTCTTCGCCCCCGATTTCTTCGGCAGTTCGCAATATCTGGACGTGTTCGGCATGCAGGACGGCTCGGTCTGGGCCAAGCGCGCTGGCGGCGACAAGGACCCGACGCTGATCAACCCGCGGGCGGGTGAGCTGAAGGCGGCGGCGCTTGCGGCCGCGACCCCGGACGAGGCCGAGAAGCTGTGGTTCGAAGCCGCGGAAGAGATGATCAAGAACCGCATCATCATTCCGATGGCGAAGCTTTCGATGCAGCGCCGGCGGCTGATTGCAGCGCTCAAAGATGGCGCTTCCGCCGCCGAGGCTTCTGCCGCTGCGGGAATGCATATCCGCTCCGCGTATCGGGCGCGTAAGAACCACAAGGATGATCGGCAAGGTTCCCTTTTCTAA
PROTEIN sequence
Length: 413
DTPDAQTVVITLTAANSEFLNQVAAGFLGVINSDVAAENGALADETAAEKDTSETWFLSHSVGSGPFVLANYEPNAELRLKRNENYWRAKPAVPEVIFRQVKDAVAQAQMLQSGEVDIAMQIDPETAKSLEGSDAVVERVPSYNFIYIALSPGAKATPIDMTPDVREAISIAIDRTALIDFTLGGDGRALAAPIPLGFPGGDGHQVPEYNPDKAKEMLAAAGLEAGFTLQTIYPDLNVYGVDFNLMMQKIQQDLAKVGIALDLQPVPFANWREIANGDHIPLTAVFFAPDFFGSSQYLDVFGMQDGSVWAKRAGGDKDPTLINPRAGELKAAALAAATPDEAEKLWFEAAEEMIKNRIIIPMAKLSMQRRRLIAALKDGASAAEASAAAGMHIRSAYRARKNHKDDRQGSLF*