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scnpilot_p_inoc_scaffold_51186_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(657..992)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat protein n=2 Tax=cellular organisms RepID=A9BX63_DELAS similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 80.0
  • Bit_score: 60
  • Evalue 1.20e-06
Rhs family protein {ECO:0000313|EMBL:KEQ01519.1}; Flags: Fragment;; TaxID=1385367 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrass similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 51.0
  • Bit_score: 72
  • Evalue 5.40e-10
RHS repeat-associated core domain protein similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 71.0
  • Bit_score: 62
  • Evalue 8.50e-08

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Taxonomy

Snodgrassella alvi → Snodgrassella → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGACTCTCAAAAAAAAAGCTGCTGGCGCTTGCTGCATAAGGGCTGGAGGCCCATTCTTCTTAAAATCCATCGCTGCCCTGGCCCTGAGCCTGGGCGCCGGCTTGGCCCACGCCCAACCCAGCACACGCCAAGTCAGCCTGCCCAACCAGGACTACACAGAAAACACCGAAGACCTGGCGGTCAAGGTACTGGGCGGGCAAGTGGCTATCAACCGCACCTGGACATTCGGGCGCTGGTACCTCAACGACCGCTGGGCCGACCTGGTGGTACTGCAACCCGATCCGAGCCATCGAGGTGACGGACAACAGCGTGGGCGATGCACCGATGCTGCCTGA
PROTEIN sequence
Length: 112
MTLKKKAAGACCIRAGGPFFLKSIAALALSLGAGLAHAQPSTRQVSLPNQDYTENTEDLAVKVLGGQVAINRTWTFGRWYLNDRWADLVVLQPDPSHRGDGQQRGRCTDAA*