ggKbase home page

scnpilot_p_inoc_scaffold_51501_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..249)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHE5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 1.00e-12
Putative phage cell wall peptidase, NlpC/P60 family {ECO:0000313|EMBL:EYR81173.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 1.50e-12
putative phage cell wall peptidase, NlpC/P60 family similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 45.0
  • Bit_score: 62
  • Evalue 6.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGCGTGAGACGCGGCCGGATGAGCGGCCGGGGCAGGATACCGGCGAATGCGTCGTTGCCATCGCCCGCAGTTTCATCGGTACGCCCTATCGGCACCAGGGGTCGCTGAAGGATGTCGGCTGCGACTGCCTCGGGCTGGTGCGCGGGGTTGAACAGCACGGGCTGCACGACGTCCGCGGCCGTCTTCGGGGGCGCCTCGGGCAGCGGAAGACGCGTGAAGAAGTAAAAGAAGGCGATGACTGCGCAGGT
PROTEIN sequence
Length: 83
MRETRPDERPGQDTGECVVAIARSFIGTPYRHQGSLKDVGCDCLGLVRGVEQHGLHDVRGRLRGRLGQRKTREEVKEGDDCAG