ggKbase home page

scnpilot_p_inoc_scaffold_51668_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..272)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain protein id=4175680 bin=GWF2_Bacteroidetes_40_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 90.0
  • Bit_score: 147
  • Evalue 5.80e-33
RagB/SusD domain-containing protein Tax=GWF2_Bacteroidetes_40_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 90.0
  • Bit_score: 147
  • Evalue 8.10e-33
carbohydrate-binding protein SusD similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 91.0
  • Bit_score: 67
  • Evalue 2.20e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Bacteroidetes_40_14_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGAAAAGAAATTTCATTATAATATTATTGGCATCTCTTAGTCTTGCTGCCTGCAGTAAAGACTATCTTGAGACAGCACCTACTGCGAGCGTTGCAGAGAAGGACCTTTTCACGACACTTACAGGTGCTCAGACACTACTTGACGGTATCCACAGATACACTTACTATTATGGTGGTGCCCACGATAAATTTGGTCAGAAGGCAATTGACTATGCAATGGATTGTCTTGGTGAGGACTTCTATCCTACAGAGAGAGGCTATGGTTGGTTT
PROTEIN sequence
Length: 90
MKRNFIIILLASLSLAACSKDYLETAPTASVAEKDLFTTLTGAQTLLDGIHRYTYYYGGAHDKFGQKAIDYAMDCLGEDFYPTERGYGWF