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scnpilot_p_inoc_scaffold_52281_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..629

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 210.0
  • Bit_score: 334
  • Evalue 1.10e-88
tRNA pseudouridine synthase A n=1 Tax=Rhizobium sp. CF122 RepID=J3BEK2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 210.0
  • Bit_score: 333
  • Evalue 1.70e-88
truA; tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 208.0
  • Bit_score: 328
  • Evalue 1.60e-87

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGTTCATCTCGACCTGGCGCGCAGCTGGCTGCCCTACAAGCTGCGCAACGCCCTGAACGCCCATCTCGGCATGGCGGGCGAGCGGGTCTCGATCGTCGATGCCGACGCCGTTCCGGATTATTTTGACGCACGTTTTTCGGCAGTGAAGCGGCAGTACCTCTATCGCATCATCTCCCGGCCGGCGCCGCTGGCGCTGGAGGCCGGACGCGCCTGGTGGGTGCCGAAACCCCTCGACCATGCGGCGATGCATGCGGCGGCGCAGATGCTGGTCGGCCATCATGATTTCACCACATTCCGCTCCGCACATTGCCAGGCCAGGAGCCCGGTGCGCACCCTCGACCGGCTGGACGTGACGCGTGACGGCCAGCTCATCGAGATCCGCGCTTCGGCGCAGAGTTTCCTGCACAACCAGATCCGCTCCTTGGCCGGCACCCTCAAGCTGGCCGGCGAAGGCAGGATGACGCCGCAGGATGTGCGCCTGGCGCTGGAGGCGCGCGACCGCACGGCTTGCGGCCCGGTTGCGCCGCCGGAAGGGCTGTATTTTTTGCAGGTCGATTATCCCGCCGTCATTCCCGAACGGCGCGGCAACCAAGGACAGACCGATGACGGTGCGGATCTATCATAA
PROTEIN sequence
Length: 209
VVHLDLARSWLPYKLRNALNAHLGMAGERVSIVDADAVPDYFDARFSAVKRQYLYRIISRPAPLALEAGRAWWVPKPLDHAAMHAAAQMLVGHHDFTTFRSAHCQARSPVRTLDRLDVTRDGQLIEIRASAQSFLHNQIRSLAGTLKLAGEGRMTPQDVRLALEARDRTACGPVAPPEGLYFLQVDYPAVIPERRGNQGQTDDGADLS*