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scnpilot_p_inoc_scaffold_52534_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 567..1316

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IM68_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 250.0
  • Bit_score: 327
  • Evalue 1.50e-86
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 250.0
  • Bit_score: 327
  • Evalue 4.20e-87
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:CAP42672.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 250.0
  • Bit_score: 327
  • Evalue 2.10e-86

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGAAGACGATGATTTTTCCGATGAGAGTGTGACGCATCCCGCTGCTGCGCGGCCGCCGCTCAGCCTGCGGCAAATAGAAGTCTTCCGCAACATCATGATCGCCGGATCGATCAGTGGCGCCGGGCGCAGCCTGCATGTGTCCCAGCCGGCGGTCAGCCGCGTCCTCGCCTTGACGGAAAGCCGGCTCGGGTATCGCCTGTTCGAGCGCAACCGAGGCCGGCTGCTTCCCACGCCCGAAGCCCGCCGGCTGTATGCGGAAGTGGAAGAAATCTACAACGGAATCCAGCGCGTCAATCAGCTTGCCGCGACCCTGGGCGAGGCCGGATCGGGCATCTTGAAGATCATTTCCAGCGCAAGCTTCGGCCAGAACCTGATTCCCCGAGCCCTTGCAGGCTTCCAGGACCGCAATCCCCACGCCCAGGTGGACTACCGCAGCGTCACCTTTGACGAGCAGGTCGGCTATTTCCTGAGCGGCGAAGCCGACGTCGGCGTCTCGATGGCTCCGCCGGACCACCCGCACTTGAAGTCGACGCTGCTTGGCCATATGGAAATCGTGTGCATCCTGCCCGAAGGCCATCCGCTGGGGGACAAGACCGTGATCCGAGCGGACGACCTGCTGCGCGGCGCATGGATAGGTTATCCGCCCGGCGCGCCATTGAGCCGCGCGTTACTGGCCTTCTTCGGCGACGCCGGCCCCTGCCGTCCGGCCGCCATCGAAGTTCACTCCCCCGTCACCGCCTATGCATTC
PROTEIN sequence
Length: 250
MEDDDFSDESVTHPAAARPPLSLRQIEVFRNIMIAGSISGAGRSLHVSQPAVSRVLALTESRLGYRLFERNRGRLLPTPEARRLYAEVEEIYNGIQRVNQLAATLGEAGSGILKIISSASFGQNLIPRALAGFQDRNPHAQVDYRSVTFDEQVGYFLSGEADVGVSMAPPDHPHLKSTLLGHMEIVCILPEGHPLGDKTVIRADDLLRGAWIGYPPGAPLSRALLAFFGDAGPCRPAAIEVHSPVTAYAF