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scnpilot_p_inoc_scaffold_55879_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..269)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJP0_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 91.0
  • Bit_score: 103
  • Evalue 1.20e-19
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:CCF84902.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 104
  • Evalue 7.80e-20
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 91.0
  • Bit_score: 101
  • Evalue 1.00e-19

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 267
GTGGTCGAGTCGAAACGGTTCTACCTCAAGGTTAACTCGATGTACCAGAAGTTGAGCAGCGAGATGAGTGGGGCCGGTGTCGACACCAGCGATGCCGACCGCGAACACGTCCGCCAGTACGTGGCGCGGGCGAAGTTCTTTATGTCGAACATCAACCAGCGCCGCGAGACCATGCTCAAGATTACAAAGTGCCTGGTCGAGACCCAGGAAGAGTTTTTGCGCGACGGCGTGCGCGGCCTGAAACCGTTGACCCGCTCGATGCTGGCA
PROTEIN sequence
Length: 89
VVESKRFYLKVNSMYQKLSSEMSGAGVDTSDADREHVRQYVARAKFFMSNINQRRETMLKITKCLVETQEEFLRDGVRGLKPLTRSMLA