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scnpilot_p_inoc_scaffold_55341_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..1155)

Top 3 Functional Annotations

Value Algorithm Source
IS4 family transposase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DYC6_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 386.0
  • Bit_score: 491
  • Evalue 7.00e-136
  • rbh
Transposase {ECO:0000313|EMBL:KES24850.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 386.0
  • Bit_score: 496
  • Evalue 4.00e-137
IS4 family transposase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 386.0
  • Bit_score: 491
  • Evalue 2.00e-136

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Taxonomy

Pseudomonas sp. AAC → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGCATCCTAATCGTCGCGTTCGTTCGCAGCAACGCCGCACGTTGCGGCAAATCGGCAAAACAGACGCCTATGCGTTCTTCGATCTGCTGACGGACGAGGCTACGCTAGATCAGGTTGAGTCTTTGCTGCCGACCCATCGTGAGCGCTTGCTGCCGCCGACGGAGACGCTGGCGATGTTCATGGCCCAGACGTTGAATGCCGATCCTTCCTGCCAGAACGCGATCAATGAGTTCTCGGCACGTCGGGTGAGCGGTGGACTGAGTGCCTGCAGCACGTCAACGGGGGCCTATTGCCAGGCACGCCTACGCCTGCCACAAGCCATGGTTTCATCGCTGGTGCGTTTCACTGGGCAAGCAATGACCACGTCGGCACCCCCTTCCGGGGCCTGGAAAGGACGACCGGTTCGGTTGGTCGATGGCACGACGGTGTCGATGGCCGACACGCCGCAAAACCAGGCCGCATTTCCACAACCGACGACGCAGAAGCCAGGGCTTGGATTCCCGATCAGTCGGCTGCTGGGCTTGTTCTGCCTGTCCAGCGGTGCCGTGCTCGACGCCGCGACCTGCGCATATCACGGCAAGGGCAATGATGAGCAAACGCTGCTGCGCAGCCTGCTGGATCGACTCGAGCCCGCCAGCGTGCTGGTCGGTGACGCGTTCTTCGCAACGTACTTCTTGCTGGCCGAACTGCACAAGCGCGGGATCGACGGCGTCTTCGAACAGCACGGCTCGCGTCGTCTCAGTACGGATTTCCGTTGTGGTCGCCGCCTCGGCGAACGCGATCATGTCATCGACCTCGAAAAGCCGAAGGTCAGACCATCATGGATGTCTGAAACGCACTATGCGCAGGCACCCGAGCGGCTGTCGGTTCGCGAGCTTCAGGTGGGCGGAAAGACGTTGGTGACGACACTCCTGTGCGCCAAGCAGACGACCAAGAATGAACTCAAGTCGCTCTATCGGCAGCGATGGCATATCGAGCTGGATTTTCGCCACCTGAAGACCACGATGGGCATGGAATTTCTTCGCAGCAAGAGTCCCGCCATGGCGATCAAGGAAATCTGGGTACATCTGCTGGCCTACAACCTGATCCGCAGGATGATGCTGCAAGCGTCCAACATGGAGCATGTGCTGCCGCGCCACTTGAGCTTCAAGCAC
PROTEIN sequence
Length: 385
MHPNRRVRSQQRRTLRQIGKTDAYAFFDLLTDEATLDQVESLLPTHRERLLPPTETLAMFMAQTLNADPSCQNAINEFSARRVSGGLSACSTSTGAYCQARLRLPQAMVSSLVRFTGQAMTTSAPPSGAWKGRPVRLVDGTTVSMADTPQNQAAFPQPTTQKPGLGFPISRLLGLFCLSSGAVLDAATCAYHGKGNDEQTLLRSLLDRLEPASVLVGDAFFATYFLLAELHKRGIDGVFEQHGSRRLSTDFRCGRRLGERDHVIDLEKPKVRPSWMSETHYAQAPERLSVRELQVGGKTLVTTLLCAKQTTKNELKSLYRQRWHIELDFRHLKTTMGMEFLRSKSPAMAIKEIWVHLLAYNLIRRMMLQASNMEHVLPRHLSFKH