ggKbase home page

scnpilot_p_inoc_scaffold_55259_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..474

Top 3 Functional Annotations

Value Algorithm Source
Phage terminase small subunit n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MCC6_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 108.0
  • Bit_score: 113
  • Evalue 2.80e-22
phage terminase small subunit similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 108.0
  • Bit_score: 113
  • Evalue 7.80e-23
Phage terminase small subunit {ECO:0000313|EMBL:CCJ48959.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella para similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 108.0
  • Bit_score: 113
  • Evalue 3.90e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATTCCGGCGCTTCCGGCGCATGAAAACGCGGGGAAATCCGACTGGACGTCCGTCTTCCTCGCCGAGCTGGCCGCCACCGGCAACGTCTCCGCCGCCGCCCGCGCCGCCGGCGTCAACCGCGACACGCCGTACGGCCGCCGCCAGACCGATCCGGCCTTCGCCGCGGCGTGGGACTCCTCCCTGGAGGAGGCGTGCGACCTCCTCGAACTGGAGGCGCGCCGCCGCGCCTTCGCCGGCGTCGTCGAGCCGGTCTTCTACAAGGGCGCGGAATGCGGCAGAATTAATAAATATTCGGATACGTTGATGATAGTCCTCCTGAAGGCCCATCGTCCCGAGAAGTACCGCGAGCGGGTCGCGACCGAGCACTCCGGAGAGGTCAAGGTTGTCATCGCCTACGACGAGGGAGATCCACCTTTCGATGCCCCGACCGCACCGGGGGCAGACGGAGGTCCTGGCGTCGACGGCCCGGTTTAG
PROTEIN sequence
Length: 158
IPALPAHENAGKSDWTSVFLAELAATGNVSAAARAAGVNRDTPYGRRQTDPAFAAAWDSSLEEACDLLELEARRRAFAGVVEPVFYKGAECGRINKYSDTLMIVLLKAHRPEKYRERVATEHSGEVKVVIAYDEGDPPFDAPTAPGADGGPGVDGPV*