ggKbase home page

scnpilot_p_inoc_scaffold_56359_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(587..1243)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 218.0
  • Bit_score: 356
  • Evalue 2.80e-95
tRNA pseudouridine synthase A n=1 Tax=Rhizobium sp. Pop5 RepID=K0WG17_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 218.0
  • Bit_score: 356
  • Evalue 2.00e-95
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 217.0
  • Bit_score: 353
  • Evalue 3.60e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ACCGATTCCGGCGTGCATGCGCTGGGGCAGGTGATCCATATCGACCTTTCCCGCGACTGGGCGGCCTACAAGCTGCGCAATGCCATGAACGCCCATCTCGCCATGGCCGGAGAGCGGGTCTCGGTGCTGGAGGTGCAGGAAGCGCCCGCCCATTTCGACGCCCGCTTCTCGGCGCTGCGCCGGCATTATCTGTATCGCATCGTCAACCGCCCGGCGCGGCTGGCGCTGGAGGCGGATCGCGCCTGGTGGGTGCCGAAGACGCTCGATCACGAGGCGATGCACGCGGCGGCCCAGATGCTGGTCGGGAAGCATGATTTCACCACCTTTCGCTCCGCCCATTGCCAGGCGACGAGCCCGGTGCGCACGCTGGACCGGCTGGATGTCACCCGAAACGGCGACCTCATCGAGATTCGCGCCACTGCGCAAAGCTTTCTGCACAACCAGATCCGCTCCTTCGCCGGCACGCTGAAACTGGCGGGCGAGGCCAAGATGTCGCCTCAGGATGTGCGCGCGGCGCTGGAGGCGCGCGACCGCAAGCAATGCGGTCCGGTCGCGCCGCCCTCCGGACTTTATTTCCTGCAAGTGGATTATCCCGAGATCATACCGGAACGGCGCGGACAACAAGGACATTCCGACGATGGTGACGATTTTTCATAA
PROTEIN sequence
Length: 219
TDSGVHALGQVIHIDLSRDWAAYKLRNAMNAHLAMAGERVSVLEVQEAPAHFDARFSALRRHYLYRIVNRPARLALEADRAWWVPKTLDHEAMHAAAQMLVGKHDFTTFRSAHCQATSPVRTLDRLDVTRNGDLIEIRATAQSFLHNQIRSFAGTLKLAGEAKMSPQDVRAALEARDRKQCGPVAPPSGLYFLQVDYPEIIPERRGQQGHSDDGDDFS*