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scnpilot_p_inoc_scaffold_56457_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1012..1242

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VE26_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 68
  • Evalue 2.90e-09
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 68
  • Evalue 8.30e-10
LysR family transcriptional regulator {ECO:0000313|EMBL:AGZ33965.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 68
  • Evalue 4.10e-09

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Taxonomy

Pseudomonas sp. VLB120 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGGAAATGATTCGTAACTTAGGGTTAATAATGCCGGAAATCTCACTAATAGAAACTTTTGTGTTAACTTCAGAGTTGGGAAGCTTAGCAGCTGTAGCGAGAACGCTTAATATTTCTCCCGCCGCGATAAGCAAACAACTGACTAAACTTGAAGAAGAGTTAGGATTACAGCTATTGATAAGATCTACACGTCGTATTGAGCTTACTGAAGTGGGGATAAATTATTGTCTA
PROTEIN sequence
Length: 77
MEMIRNLGLIMPEISLIETFVLTSELGSLAAVARTLNISPAAISKQLTKLEEELGLQLLIRSTRRIELTEVGINYCL