ggKbase home page

scnpilot_p_inoc_scaffold_56872_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(866..1234)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) RepID=F4P6S0_BATDJ similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 143
  • Evalue 1.90e-31
Putative uncharacterized protein {ECO:0000313|EMBL:EGF78864.1}; TaxID=684364 species="Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Rhizophydiales incertae sedis; Batrachochytri similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 143
  • Evalue 2.70e-31
GM26246 gene product from transcript GM26246-RA; K12393 AP-1 complex subunit mu similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 116.0
  • Bit_score: 138
  • Evalue 1.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Batrachochytrium dendrobatidis → Batrachochytrium → Rhizophydiales → Chytridiomycetes → Chytridiomycota → Fungi

Sequences

DNA sequence
Length: 369
GAAATCAACATTCCTGTACCTGCTGATGCTGATACTCCACGATTGAATCCTTGTCTTGGATATGCCAAGTATGCACCAGAGAGCAATTCCATTGTCTGGTTTATTGGCTTTTACCCGGGTGGCAAGGAATTTTCTTTACGCGTCAAATTGGGCTTGTCTACTATAAAAAGTACACTTGAAAGTGAAGCTAGCACGCTGGCGAGACCCATTTCGCTTGGCTTTAAAATTCCTTACTATACCATGTCGGGTATTCAAGTGCGATACTTGAAAATTGTAGAAAAATGCGGGTATCCGTCTCTGCCGTGGGTTCGTTACATTACTCAGCAAGGCGAATATCATTTTCGCATGCCCGAATTACCAAGTAAATAA
PROTEIN sequence
Length: 123
EINIPVPADADTPRLNPCLGYAKYAPESNSIVWFIGFYPGGKEFSLRVKLGLSTIKSTLESEASTLARPISLGFKIPYYTMSGIQVRYLKIVEKCGYPSLPWVRYITQQGEYHFRMPELPSK*