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scnpilot_p_inoc_scaffold_54194_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..354)

Top 3 Functional Annotations

Value Algorithm Source
CtrC-like capsule polysaccharide ABC exporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXE5_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 113.0
  • Bit_score: 96
  • Evalue 2.00e-17
CtrC-like capsule polysaccharide ABC exporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 113.0
  • Bit_score: 96
  • Evalue 5.70e-18
CtrC-like capsule polysaccharide ABC exporter, permease protein {ECO:0000313|EMBL:AGB74790.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 113.0
  • Bit_score: 96
  • Evalue 2.80e-17

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGCAGCATCTTCTGAGAGCGAGCAAGCATCTGACGATCTTCCGCGACATTCATCTTCTGGACGCGGTCTTCACGCGGTTCCTGCTCGATTTCGTTTCCATCTCGGCGAGCGCCCTGATCGTCTATCTGGTCCTGCAGGCGGCGGGCTCCATGCCCGAGGCCCATGACTGGTCCGACATCCTTCATGGCTGGTTCCTGATGGGGGGGCTCGGCTTCGGTGCTGGCCTCCTGACCGCGGCGCTCAGCGAGCTCTCCGAGATCGTGGAGAAGCTCGTCGGACCGGTTCAGTATTTCCTGCTGCCGTTCTGCGGCTGCTTTTACATGGTGACATGGCTGCCGGATCCCGCGAAGGAC
PROTEIN sequence
Length: 118
MQHLLRASKHLTIFRDIHLLDAVFTRFLLDFVSISASALIVYLVLQAAGSMPEAHDWSDILHGWFLMGGLGFGAGLLTAALSELSEIVEKLVGPVQYFLLPFCGCFYMVTWLPDPAKD