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scnpilot_p_inoc_scaffold_56996_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1233

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=266265 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 416.0
  • Bit_score: 101
  • Evalue 2.30e-18
Ribonuclease E n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13VK4_BURXL similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 416.0
  • Bit_score: 101
  • Evalue 1.70e-18
ribonuclease, Rne/Rng family domain protein similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 426.0
  • Bit_score: 104
  • Evalue 7.30e-20

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Taxonomy

Burkholderia xenovorans → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
AGCACCACGAGAGTGGACAGCATCAAGCCCGCGGCCGCGGCGCCCGCCGCCAGCGCCAGCGTCAGTGCCAGTGCCAGTGCCAGCGGTCCCCGCAATGAAATGAGCTGGGACCGCCGCCGCCAGAACTCCGCTGTCTCTGCTGCGCCCGCCGCTGGTGGCGCCGCCGAGCCGACCAGCGCGGCGGCCGTGGGCGACGGCCCCCGCGACGGCCACCGCGATACTCGTGACGCTCGTGACTCCCGTGACCGCGAGCACAAGGACCGCGAGCGCGACCGCGACTTCGGCCGCCGCGGCGACGCCCGTGACGCCCGTGACTCCCGCGACGCCCGCGACTCTCGCGGTCCCCGTGACTCCCGTGACTCTCGCGACAACCGCGATGACCGCGATGACCGCGTCCGCCGCAGCGACCGCGGCGACCGCGGCGACAACCGCGGTGAGCGTGGCGGCGAGCGCGGCGGCGAGCGCCGTCGCGGCGGCGGGCCGGTGCGCGATACACCCGAGTCCGTACTGGCCGTGGCGGCGGCGGCCGAGGCGGCGGAGCGCGAGGCCGCGCAGGGCGCGTGGGTCACCGTCTCGGACAAGCCCCCGCGCCCCGCCGCGGGCGACCGCGATCACGGCGTCCACCGCGACCGTGACGGTCACCGCGACGGACACCGCGGCGGCGACCGCGGCGGCGACCGCGGGAGTGACCGTGAGCCCCGCGTCCGCGGCAGCGACCGCGCCGCTGCTCCCGCGCAGGCGCAGTCGCAGCGCAGCGACGCCGCGGCGGCGGGCGGCGCGCACAGCGGCACCACGAGCTTCATGCGCGGCGGCCGCGGCGGCACGGGCCGCGGCGCTCACGACAACGGCGGCGGCGCGGCACCCGTGCCGCTGACCGCCGCCGCCGTCGTCGCCGCGGCCACCCACGGACACGGACACGGTCACGGACACAGTCAGGGCCACAGCAATGCAAGCCGCGGCAGCTCGCGCAACGTGTCGGCCGCGGGCTCCCCGGCCCTGGCCCCCGCGCGCGCCCCCGCCCACGGTCACGCCGCCCACGGTATCGCCGCCCACGGTCACGAGCTCAAGCGCAGCGGCCCCGCGGCCGCCGAGCCTGAGTCCGAGGCCGAGTCCTCCGCGGCTGCGACCGCGGCGGCCGTGGCCGAGGCCGAGGCGCTGGTGACGCTGGAGCCCGAGCTGACGAGCGGCGGTGGCGTGCGCAAGCTCGCCCCACGCAAGCCCGTGCCCGCGAGC
PROTEIN sequence
Length: 411
STTRVDSIKPAAAAPAASASVSASASASGPRNEMSWDRRRQNSAVSAAPAAGGAAEPTSAAAVGDGPRDGHRDTRDARDSRDREHKDRERDRDFGRRGDARDARDSRDARDSRGPRDSRDSRDNRDDRDDRVRRSDRGDRGDNRGERGGERGGERRRGGGPVRDTPESVLAVAAAAEAAEREAAQGAWVTVSDKPPRPAAGDRDHGVHRDRDGHRDGHRGGDRGGDRGSDREPRVRGSDRAAAPAQAQSQRSDAAAAGGAHSGTTSFMRGGRGGTGRGAHDNGGGAAPVPLTAAAVVAAATHGHGHGHGHSQGHSNASRGSSRNVSAAGSPALAPARAPAHGHAAHGIAAHGHELKRSGPAAAEPESEAESSAAATAAAVAEAEALVTLEPELTSGGGVRKLAPRKPVPAS