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scnpilot_p_inoc_scaffold_61355_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 103..894

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein; K03205 type IV secretion system protein VirD4 id=12553512 bin=BDI species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 264.0
  • Bit_score: 490
  • Evalue 1.40e-135
conjugal transfer protein; K03205 type IV secretion system protein VirD4 Tax=RBG_16_Gallionellales_56_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 272.0
  • Bit_score: 285
  • Evalue 7.30e-74
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 269.0
  • Bit_score: 252
  • Evalue 1.40e-64

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Taxonomy

RBG_16_Gallionellales_56_9_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGACGAATTTACGTCCATGGGCAAAGTCAACATTTTGAGCAAGGGAATTAGTTTTATTGCAGGCTACGGATTGCGAATGATGCCCATCATTCAAAGCCCGGCGCAACTCACGGACGTTTATGGCCGCGAAGCCGCTGAAACATTCCGCACCAATCACGCACTCAACATTGTATTTCCGCCAAAAGCATCCGAAACCGAATCTGCACGCGACATTTCCGAATGGTTAGGCTATACAACTACTAAGAACGCATCAAAGTCCCGAAACACCGAAATATTCAAGCGCCGCAATTCTTCGGAGAGCGTCAGCGATCAACGTCGCGCGTTACTTCTTCCTCAAGAAATAACCTCCTTGGGTGAGGAAGCAGAATTGATCGTTTTGGAAAACGTCCTTCCCATTCAGGCCAAAAAGGTTCGATATTTCGCGGACGCGAAATTCATGGATAGACTCAAGGAAGTTTCACCATCATTGAGTGCTATTGGGGGAAGATTGCCCACTAAGAAAGAGATGGACGATGCAATGCGTGCTGGCGAACTGGCGGCGCCCGTTCCACTGCTTAGCATAAATGAATATCAAGATGTAATTGCTTCTGCTGAAGGATCAATTGAGCAAGTAAGCAGCGGTACTAATCTCCATCGCGCATTTATTCCTGATGACTATCCGCGTATTTCTGAGATTAATTTCGCACTTGATTTATCAAGCATCAAACCGCCTCCAGAAGGCGAACGCACCATAGAGAAGTTACACGAATATGCAGACAGAATAAGCCGGGAACAGGGATTCCTAGTTTAG
PROTEIN sequence
Length: 264
MDEFTSMGKVNILSKGISFIAGYGLRMMPIIQSPAQLTDVYGREAAETFRTNHALNIVFPPKASETESARDISEWLGYTTTKNASKSRNTEIFKRRNSSESVSDQRRALLLPQEITSLGEEAELIVLENVLPIQAKKVRYFADAKFMDRLKEVSPSLSAIGGRLPTKKEMDDAMRAGELAAPVPLLSINEYQDVIASAEGSIEQVSSGTNLHRAFIPDDYPRISEINFALDLSSIKPPPEGERTIEKLHEYADRISREQGFLV*