ggKbase home page

scnpilot_p_inoc_scaffold_61712_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1158

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 399.0
  • Bit_score: 272
  • Evalue 8.70e-70
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 399.0
  • Bit_score: 272
  • Evalue 2.50e-70
RagB/SusD domain protein {ECO:0000313|EMBL:ACU05054.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepar similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 399.0
  • Bit_score: 272
  • Evalue 1.20e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1158
CGTATTGTAGCTGGTACAGTTTTCAAAGAAGAAGGTACCGCGGTCGCTGCATTAAATGGTTTGTACGCACGTGTGGCAGGTGGTAGACCTCCATTTACATCCGGAGGACTAACAATGTATCTAGGAATCTACTCGGATGAACTAGGTTCAAACTATCCCACAACCTCCACGGAATTCACAGACTTTGCTAATGGAAGACTGTCGGAAAATAACGCTGCTGTTTCCACAACATACTGGCGTGAAGCGTACGAAATGATTTTTCATGCAAATTCAATAATCAAGGGCTTAGAATCTTCCCCTATTAAAGAAAATTTGAAAAATCAACTCTTGGGCGAAACCTATTTTATTAGAGCATTTTGCTATTGGTATATGCAAAGTCTATTTGGTGATGTTCCTCTAGTACTAGACCCTAACGATTATGAAAATAATTCCATTATGCCACGTACACCAGTAGCAGACGTACATACACGCGTAATGGCCGATTTGATGGAAGCAAAAAGTAGAGTAAGCAAAACCTATCCCTCAACCGGGAAATACCGTGTTAACTACTACACCGTATTGGCTTTTTTATCTCGTATTTACACCAACGAGGGCAATTGGCAAGATGCTTTAAATACCTCGAATGAAATTATTGCTTCAAATATTTACAAATTGGAAACTGATTTAAACAAAGTGTTTTTGAATACCAGTACCGAAGCTATATGGCAATCTGCAACTGATGGCGCTGCTTATGTAATAGAAGCCAACCTGCTTATTCCTAGCACCCTGGCGACTGCACGGCCGAATATGCCGTTAACTACGCAATTACTAACAGCTTTCGAAAGCGGTGATCAACGCAGAAGCAATTGGGTGGCAAGTAAAACGGTTTCGGGTACAACATGGTACTATCCCTACAAATATAAAGTTCGAACAGTTGGGACCGGAGTTGCCAGAACCGAAAGTTTGGCAATGTTCCGACTGGCTGAAATTTACTTGAATCGGGCGGAAGCAAAGGCGCATTTAAGTGATGCCACTGCAAAAGACGACCTGAACCAAATACGTAACCGTGCCGGGCTGGGCAGTATAAGTCCTACCGGAACTTCTTTAACAGATGCGATAATACGCGAGCGCCGAATTGAATTGTTTGCAGAATTTGGTTTGCGCTTTTTTGATTTGCGC
PROTEIN sequence
Length: 386
RIVAGTVFKEEGTAVAALNGLYARVAGGRPPFTSGGLTMYLGIYSDELGSNYPTTSTEFTDFANGRLSENNAAVSTTYWREAYEMIFHANSIIKGLESSPIKENLKNQLLGETYFIRAFCYWYMQSLFGDVPLVLDPNDYENNSIMPRTPVADVHTRVMADLMEAKSRVSKTYPSTGKYRVNYYTVLAFLSRIYTNEGNWQDALNTSNEIIASNIYKLETDLNKVFLNTSTEAIWQSATDGAAYVIEANLLIPSTLATARPNMPLTTQLLTAFESGDQRRSNWVASKTVSGTTWYYPYKYKVRTVGTGVARTESLAMFRLAEIYLNRAEAKAHLSDATAKDDLNQIRNRAGLGSISPTGTSLTDAIIRERRIELFAEFGLRFFDLR